C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mesoderm induction early response 1, family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032727 Mier3 10090 + 13:111686178-111718596 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047412 Mier3-002 111686351-111717636 protein_coding
  ENSMUST00000109271 Mier3-004 111686351-111717636 protein_coding
  ENSMUST00000109272 Mier3-001 111686178-111718596 protein_coding
  ENSMUST00000137268 Mier3-005 111686326-111718593 nonsense_mediated_decay
  ENSMUST00000146726 Mier3-003 111686325-111691811 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047412ENSMUST00000109271ENSMUST00000109272ENSMUST00000137268ENSMUST00000146726
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047412 N/A 1.192±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.498±0.42 N/A N/A
ENSMUST00000109271 1.708±0.26 3.368±1.06 N/A 1.770±0.00 2.689±1.13 3.767±1.54 0.390±0.07 0.917±0.33 0.744±0.25 1.198±0.03 N/A 3.414±1.48 2.823±0.43 3.160±0.48
ENSMUST00000109272 2.866±1.23 0.918±0.10 5.096±0.11 3.303±1.93 1.659±0.61 3.751±0.40 1.388±0.51 3.212±0.21 5.049±3.44 1.906±0.26 0.982±0.31 2.171±1.30 3.335±2.23 11.804±1.91
ENSMUST00000137268 N/A 2.418±0.00 N/A N/A 1.307±0.00 3.751±1.61 N/A N/A 1.634±0.79 1.896±0.62 0.986±0.00 3.518±0.07 N/A N/A
ENSMUST00000146726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.293±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089D CIL_00089D_0002 VISTA 13:111652900-112255571

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006253 mier3 mesoderm induction early response 1, family member 3 protein_coding Danio_rerio
ENSDARG00000021288 MIER3 (2 of 2) mesoderm induction early response 1, family member 3 protein_coding Danio_rerio
ENSG00000155545 MIER3 mesoderm induction early response 1, family member 3 protein_coding Homo_sapiens

Loading