C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155754 ALS2CR11 9606 - 2:201487425-201619178 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000286195 ALS2CR11-001 201487425-201619175 protein_coding
  ENST00000439140 ALS2CR11-003 201487608-201619175 protein_coding
  ENST00000439802 ALS2CR11-002 201487525-201619154 protein_coding
  ENST00000450242 ALS2CR11-005 201535004-201619178 protein_coding
  ENST00000482942 ALS2CR11-006 201487801-201511827 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000286195ENST00000439140ENST00000439802ENST00000450242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000286195 0.087±0.00 0.045±0.00 N/A 0.145±0.00 0.233±0.00 N/A 0.359±0.10 N/A N/A 0.086±0.00 N/A 0.043±0.00 0.024±0.00 10.901±0.00
ENST00000439140 0.011±0.00 0.039±0.00 0.025±0.00 0.065±0.00 0.040±0.00 0.001±0.00 0.069±0.01 0.021±0.00 0.011±0.00 N/A N/A 0.090±0.03 0.007±0.00 6.338±0.82
ENST00000439802 N/A N/A 0.054±0.00 0.562±0.00 N/A 0.039±0.00 0.837±0.00 0.047±0.00 0.142±0.00 0.268±0.25 0.174±0.00 0.182±0.05 0.048±0.00 N/A
ENST00000450242 N/A N/A N/A N/A 0.104±0.01 0.013±0.00 0.583±0.00 N/A N/A N/A N/A 0.172±0.18 0.044±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0001 VISTA 2:201132231-201734391
CIL_00020Q CIL_00020Q_0001 CGP 2:201387858-201619178
CIL_00020P CIL_00020P_0001 CGP 2:201487425-201643570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000072295 Als2cr11 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 (human) protein_coding Mus_musculus

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