C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439802 ALS2CR11-002 ENSG00000155754 9606 - 2:201487525-201619154 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000439802
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000439802 0.054±0.00 0.562±0.00 0.039±0.00 0.837±0.00 0.047±0.00 0.142±0.00 0.268±0.25 0.174±0.00 0.182±0.05 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0001 VISTA 2:201132231-201734391
CIL_00020Q CIL_00020Q_0001 CGP 2:201387858-201619178
CIL_00020P CIL_00020P_0001 CGP 2:201487425-201643570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097080 Als2cr11-001 protein_coding Mus_musculus 0 438

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