C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 domain containing ring finger 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156463 SH3RF2 9606 + 5:145936579-146081791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359120 SH3RF2-001 145936579-146063316 protein_coding
  ENST00000503848 SH3RF2-006 146050064-146062781 processed_transcript
  ENST00000504522 SH3RF2-008 146055822-146060151 retained_intron
  ENST00000506591 SH3RF2-007 145936705-145937931 processed_transcript
  ENST00000509286 SH3RF2-004 146043030-146049233 processed_transcript
  ENST00000511217 SH3RF2-002 145937877-146081791 protein_coding
  ENST00000511705 SH3RF2-003 146050086-146062781 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359120ENST00000511217ENST00000511705
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359120 0.097±0.00 0.085±0.00 0.072±0.00 0.207±0.00 1.475±0.00 0.796±0.00 46.171±0.00 0.081±0.00 1.549±0.00 1.462±0.00 6.253±0.00 0.681±0.16 0.150±0.00 N/A
ENST00000511217 0.141±0.00 0.103±0.00 N/A 0.186±0.02 0.897±0.00 0.673±0.00 N/A 0.025±0.00 0.186±0.00 0.298±0.00 3.031±0.00 0.501±0.00 0.042±0.04 1.444±0.12
ENST00000511705 0.226±0.00 0.298±0.00 N/A N/A N/A N/A 43.378±38.95 N/A 1.472±0.00 N/A N/A N/A 0.616±0.65 83.479±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AJ CIL_0001AJ_0001 CGP 5:145859733-146081791

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005515 IPI:IEA protein binding
GO:0008157 IDA protein phosphatase 1 binding
GO:0008270 IEA zinc ion binding
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0019902 IDA phosphatase binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086954 SH3RF2 SH3 domain containing ring finger 2 protein_coding Danio_rerio
ENSMUSG00000057719 Sh3rf2 SH3 domain containing ring finger 2 protein_coding Mus_musculus

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