C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 domain containing ring finger 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057719 Sh3rf2 10090 + 18:42053667-42158960 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072008 Sh3rf2-001 42053667-42158960 protein_coding
  ENSMUST00000074679 Sh3rf2-002 42053710-42158451 protein_coding
  ENSMUST00000128066 Sh3rf2-004 42141985-42153140 processed_transcript
  ENSMUST00000132681 Sh3rf2-003 42141897-42156126 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072008ENSMUST00000074679ENSMUST00000128066ENSMUST00000132681
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072008 0.301±0.06 0.112±0.04 0.476±0.20 0.987±0.00 0.418±0.37 1.055±0.43 1.589±1.10 0.045±0.00 0.013±0.01 4.196±0.22 3.276±1.63 0.085±0.04 0.842±0.81 N/A
ENSMUST00000074679 0.080±0.04 0.016±0.00 N/A 0.041±0.00 0.191±0.15 1.024±0.22 0.974±0.36 0.016±0.01 0.018±0.01 1.022±0.22 1.172±0.38 0.110±0.06 0.743±0.89 8.779±0.72
ENSMUST00000128066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.656±0.00 N/A N/A
ENSMUST00000132681 0.062±0.00 N/A N/A N/A N/A N/A N/A 0.097±0.04 0.011±0.00 N/A N/A 0.336±0.00 0.199±0.00 124.848±61.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AJ CIL_0001AJ_0002 CGP 18:41986201-42158960

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005575 ND cellular_component
GO:0008157 ISS protein phosphatase 1 binding
GO:0008270 IEA zinc ion binding
GO:0010923 ISS negative regulation of phosphatase activity
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0019902 ISS phosphatase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086954 SH3RF2 SH3 domain containing ring finger 2 protein_coding Danio_rerio
ENSG00000156463 SH3RF2 SH3 domain containing ring finger 2 protein_coding Homo_sapiens

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