C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001AJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204928-ENSG00000156463 CGP 9606 5:145859733-146081791
GeneTranscriptPositionBiotype
ENSG00000156463 (SH3RF2)
SH3 domain containing ring finger 2 		ENST00000359120 (SH3RF2-001) 145936579-146063316 protein_coding
ENST00000503848 (SH3RF2-006) 146050064-146062781 processed_transcript
ENST00000504522 (SH3RF2-008) 146055822-146060151 retained_intron
ENST00000506591 (SH3RF2-007) 145936705-145937931 processed_transcript
ENST00000509286 (SH3RF2-004) 146043030-146049233 processed_transcript
ENST00000511217 (SH3RF2-002) 145937877-146081791 protein_coding
ENST00000511705 (SH3RF2-003) 146050086-146062781 processed_transcript
ENSG00000204928 (GRXCR2)
glutaredoxin, cysteine rich 2 		ENST00000377976 (GRXCR2-001) 145859733-145872968 protein_coding
ENSG00000248493 (AC005351.1)
 ENST00000511152 (AC005351.1-001) 145997218-145998003 processed_pseudogene
CIL_0001AJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073574-ENSMUSG00000057719 CGP 10090 18:41986201-42158960
GeneTranscriptPositionBiotype
ENSMUSG00000057719 (Sh3rf2)
SH3 domain containing ring finger 2 		ENSMUST00000072008 (Sh3rf2-001) 42053667-42158960 protein_coding
ENSMUST00000074679 (Sh3rf2-002) 42053710-42158451 protein_coding
ENSMUST00000128066 (Sh3rf2-004) 42141985-42153140 processed_transcript
ENSMUST00000132681 (Sh3rf2-003) 42141897-42156126 processed_transcript
ENSMUSG00000073574 (Grxcr2)
glutaredoxin, cysteine rich 2 		ENSMUST00000097591 (Grxcr2-201) 41986201-41999049 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AJ_0001ENSG00000156463ENST00000359120ENST00000503848ENST00000504522ENST00000506591ENST00000509286ENST00000511217ENST00000511705ENSG00000204928ENST00000377976ENSG00000248493ENST00000511152CIL_0001AJ_0002ENSMUSG00000057719ENSMUST00000072008ENSMUST00000074679ENSMUST00000128066ENSMUST00000132681ENSMUSG00000073574ENSMUST00000097591
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AJ_0001ENSG00000156463ENST00000359120ENST00000511217ENST00000511705ENSG00000204928ENST00000377976ENSG00000248493ENST00000511152CIL_0001AJ_0002ENSMUSG00000057719ENSMUST00000072008ENSMUST00000074679ENSMUST00000128066ENSMUST00000132681ENSMUSG00000073574ENSMUST00000097591
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156463 ENST00000359120 0.097±0.00 0.085±0.00 0.072±0.00 0.207±0.00 1.475±0.00 0.796±0.00 46.171±0.00 0.081±0.00 1.549±0.00 1.462±0.00 6.253±0.00 0.681±0.16 0.150±0.00 N/A
ENST00000503848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511217 0.141±0.00 0.103±0.00 N/A 0.186±0.02 0.897±0.00 0.673±0.00 N/A 0.025±0.00 0.186±0.00 0.298±0.00 3.031±0.00 0.501±0.00 0.042±0.04 1.444±0.12
ENST00000511705 0.226±0.00 0.298±0.00 N/A N/A N/A N/A 43.378±38.95 N/A 1.472±0.00 N/A N/A N/A 0.616±0.65 83.479±0.71
ENSG00000204928 ENST00000377976 N/A 0.089±0.00 N/A N/A N/A N/A 1.205±0.89 N/A N/A N/A N/A N/A N/A 0.604±0.32
ENSG00000248493 ENST00000511152 0.015±0.00 0.015±0.00 N/A 0.016±0.00 0.100±0.08 0.334±0.00 0.028±0.00 0.901±0.00 0.027±0.00 N/A N/A 0.036±0.00 N/A 0.069±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000057719 ENSMUST00000072008 0.301±0.06 0.112±0.04 0.476±0.20 0.987±0.00 0.418±0.37 1.055±0.43 1.589±1.10 0.045±0.00 0.013±0.01 4.196±0.22 3.276±1.63 0.085±0.04 0.842±0.81 N/A
ENSMUST00000074679 0.080±0.04 0.016±0.00 N/A 0.041±0.00 0.191±0.15 1.024±0.22 0.974±0.36 0.016±0.01 0.018±0.01 1.022±0.22 1.172±0.38 0.110±0.06 0.743±0.89 8.779±0.72
ENSMUST00000128066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.656±0.00 N/A N/A
ENSMUST00000132681 0.062±0.00 N/A N/A N/A N/A N/A N/A 0.097±0.04 0.011±0.00 N/A N/A 0.336±0.00 0.199±0.00 124.848±61.99
ENSMUSG00000073574 ENSMUST00000097591 N/A N/A N/A 0.051±0.04 N/A N/A N/A N/A N/A N/A 0.047±0.00 0.221±0.12 0.059±0.00 0.031±0.00

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