C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, alpha D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156886 ITGAD 9606 + 16:31393312-31426505 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000389202 ITGAD-001 31393312-31426505 protein_coding
  ENST00000444228 ITGAD-003 31393335-31408619 retained_intron
  ENST00000567308 ITGAD-004 31423942-31424715 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000389202ENST00000444228ENST00000567308
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000389202 0.989±0.00 0.011±0.00 0.029±0.00 0.015±0.00 0.036±0.00 N/A 0.106±0.00 0.201±0.00 0.235±0.18 0.410±0.16 0.026±0.01
ENST00000444228 N/A N/A N/A N/A N/A 0.037±0.00 0.109±0.04 N/A 0.111±0.00 N/A 0.111±0.00
ENST00000567308 N/A 0.807±0.00 N/A N/A N/A 0.551±0.00 0.273±0.00 N/A 0.124±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035N CIL_00035N_0001 CGP 16:31355134-31426505
CIL_000436 CIL_000436_0001 CGP 16:31393312-31428428

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006955 NAS immune response
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 TAS integrin complex
GO:0009986 IC cell surface
GO:0030198 TAS extracellular matrix organization
GO:0034113 IMP heterotypic cell-cell adhesion
GO:0046872 IEA metal ion binding
GO:0050798 IEA activated T cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002956 ITGAX integrin, alpha X (complement component 3 receptor 4 subunit) protein_coding Danio_rerio
ENSMUSG00000070369 Itgad integrin, alpha D protein_coding Mus_musculus

Loading