C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, alpha D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070369 Itgad 10090 + 7:128154376-128223816 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033051 Itgad-001 128173946-128205504 protein_coding
  ENSMUST00000106237 Itgad-002 128154376-128205501 protein_coding
  ENSMUST00000176249 Itgad-005 128203874-128223816 protein_coding
  ENSMUST00000177111 Itgad-003 128173955-128205501 protein_coding
  ENSMUST00000177383 Itgad-004 128203612-128205504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverOvaryPlacentaTestisENSMUST00000106237ENSMUST00000177111ENSMUST00000177383
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Ovary Placenta Testis
ENSMUST00000106237 N/A N/A N/A N/A N/A N/A N/A 0.057±0.02 N/A 2.618±0.79
ENSMUST00000177111 0.111±0.02 0.048±0.01 0.041±0.00 N/A 0.215±0.00 0.075±0.03 0.023±0.02 0.086±0.06 0.180±0.00 0.454±0.00
ENSMUST00000177383 N/A N/A N/A 0.047±0.00 N/A N/A N/A 0.236±0.02 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035N CIL_00035N_0002 CGP 7:128129547-128223816
CIL_000436 CIL_000436_0002 CGP 7:128154376-128223816

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 IEA integrin complex
GO:0016021 IEA integral component of membrane
GO:0034113 IEA heterotypic cell-cell adhesion
GO:0046872 IEA metal ion binding
GO:0050798 IMP activated T cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002956 ITGAX integrin, alpha X (complement component 3 receptor 4 subunit) protein_coding Danio_rerio
ENSG00000156886 ITGAD integrin, alpha D protein_coding Homo_sapiens

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