C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00035N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140678-ENSG00000156886 CGP 9606 16:31355134-31426505
GeneTranscriptPositionBiotype
ENSG00000140678 (ITGAX)
integrin, alpha X (complement component 3 receptor 4 subunit) 		ENST00000268296 (ITGAX-001) 31355134-31382997 protein_coding
ENST00000562138 (ITGAX-010) 31371474-31372654 retained_intron
ENST00000562522 (ITGAX-004) 31355222-31382943 protein_coding
ENST00000562918 (ITGAX-003) 31355174-31358455 protein_coding
ENST00000564308 (ITGAX-008) 31355134-31356278 retained_intron
ENST00000567409 (ITGAX-002) 31355188-31357862 retained_intron
ENST00000571644 (ITGAX-005) 31359937-31382932 retained_intron
ENSG00000156886 (ITGAD)
integrin, alpha D 		ENST00000389202 (ITGAD-001) 31393312-31426505 protein_coding
ENST00000444228 (ITGAD-003) 31393335-31408619 retained_intron
ENST00000567308 (ITGAD-004) 31423942-31424715 retained_intron
ENSG00000260757 (RP11-120K18.2)
 ENST00000567545 (RP11-120K18.2-001) 31402565-31404699 sense_overlapping
ENSG00000261245 (RP11-120K18.3)
 ENST00000561830 (RP11-120K18.3-001) 31361278-31361695 unprocessed_pseudogene
CIL_00035N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030789-ENSMUSG00000070369 CGP 10090 7:128129547-128223816
GeneTranscriptPositionBiotype
ENSMUSG00000030785 (Cox6a2)
cytochrome c oxidase subunit VIa polypeptide 2 		ENSMUST00000033049 (Cox6a2-201) 128205436-128206366 protein_coding
ENSMUSG00000030789 (Itgax)
integrin alpha X 		ENSMUST00000033053 (Itgax-201) 128129547-128150656 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035N_0001ENSG00000140678ENST00000268296ENST00000562138ENST00000562522ENST00000562918ENST00000564308ENST00000567409ENST00000571644ENSG00000156886ENST00000389202ENST00000444228ENST00000567308ENSG00000260757ENST00000567545ENSG00000261245ENST00000561830CIL_00035N_0002ENSMUSG00000030785ENSMUST00000033049ENSMUSG00000030789ENSMUST00000033053
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035N_0001ENSG00000140678ENST00000268296ENST00000562522ENST00000562918ENST00000567409ENST00000571644ENSG00000156886ENST00000389202ENST00000444228ENST00000567308ENSG00000260757ENST00000567545ENSG00000261245ENST00000561830CIL_00035N_0002ENSMUSG00000030785ENSMUST00000033049ENSMUSG00000030789ENSMUST00000033053
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140678 ENST00000268296 1.888±0.00 1.585±0.00 N/A 0.190±0.06 2.316±1.11 0.560±0.00 0.288±0.00 0.640±0.00 N/A 4.949±4.03 N/A 1.410±0.95 1.124±0.15 0.217±0.02
ENST00000562138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562522 N/A N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A 0.112±0.00
ENST00000562918 N/A N/A N/A 0.392±0.00 N/A N/A N/A N/A N/A 7.216±0.00 N/A 0.900±0.00 N/A 0.234±0.00
ENST00000564308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567409 N/A N/A N/A N/A 1.197±0.00 0.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571644 0.650±0.00 1.443±0.00 0.180±0.00 0.110±0.05 0.810±0.00 N/A 0.240±0.00 0.115±0.00 0.142±0.00 2.234±0.00 0.280±0.15 0.568±0.34 0.583±0.17 0.217±0.00
ENSG00000156886 ENST00000389202 N/A 0.989±0.00 N/A 0.011±0.00 0.029±0.00 0.015±0.00 0.036±0.00 N/A N/A 0.106±0.00 0.201±0.00 0.235±0.18 0.410±0.16 0.026±0.01
ENST00000444228 N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 0.109±0.04 N/A 0.111±0.00 N/A 0.111±0.00
ENST00000567308 N/A N/A N/A 0.807±0.00 N/A N/A N/A N/A 0.551±0.00 0.273±0.00 N/A 0.124±0.00 N/A N/A
ENSG00000260757 ENST00000567545 0.133±0.00 N/A N/A 0.147±0.00 0.209±0.00 0.030±0.00 N/A 0.065±0.00 0.065±0.00 0.038±0.00 N/A 0.118±0.00 N/A 0.044±0.01
ENSG00000261245 ENST00000561830 0.176±0.00 N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030785 ENSMUST00000033049 0.502±0.23 1.041±0.18 0.165±0.04 0.559±0.41 135.859±180.33 0.545±0.18 2266.475±796.31 15.570±12.31 0.412±0.40 89.660±5.64 743.100±138.10 0.681±0.42 0.200±0.08 N/A
ENSMUSG00000030789 ENSMUST00000033053 1.830±0.87 0.549±0.19 0.884±0.10 0.044±0.02 2.469±0.64 1.216±0.52 0.121±0.03 0.380±0.14 0.107±0.08 10.888±0.70 0.077±0.08 0.803±0.33 0.166±0.22 0.078±0.06

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