C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 38, member 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157637 SLC38A10 9606 - 17:81245000-81295547 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000288439 SLC38A10-002 81251196-81295267 protein_coding
  ENST00000374759 SLC38A10-001 81245000-81295305 protein_coding
  ENST00000539643 SLC38A10-004 81245004-81247635 retained_intron
  ENST00000539748 SLC38A10-006 81282189-81295547 protein_coding
  ENST00000540233 SLC38A10-007 81288733-81294914 processed_transcript
  ENST00000540966 SLC38A10-010 81246178-81252273 protein_coding
  ENST00000542075 SLC38A10-003 81246615-81285714 retained_intron
  ENST00000543204 SLC38A10-008 81279699-81282264 protein_coding
  ENST00000546352 SLC38A10-009 81260361-81282216 processed_transcript
  ENST00000573058 SLC38A10-011 81250877-81252503 retained_intron
  ENST00000576151 SLC38A10-012 81246272-81252272 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000288439ENST00000374759ENST00000539643ENST00000542075
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000288439 N/A N/A 2.049±0.00 0.850±0.00 5.411±0.00 N/A 0.972±0.00 N/A 3.152±0.00 3.202±0.00 1.969±0.00 5.185±3.09 N/A 6.747±0.00
ENST00000374759 25.635±0.00 19.577±0.00 N/A 2.110±1.87 19.943±18.79 5.536±4.13 11.198±0.00 15.499±10.90 13.392±12.23 19.687±0.00 5.224±0.00 32.547±22.41 49.393±11.69 12.727±3.51
ENST00000539643 N/A 8.943±0.00 N/A N/A N/A 1.391±0.00 N/A N/A N/A 1.354±0.00 N/A 4.133±3.03 N/A N/A
ENST00000542075 N/A N/A 0.466±0.00 N/A N/A 1.938±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043W CIL_00043W_0002 CGP 17:81239239-81295547

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0006814 IEA sodium ion transport
GO:0006865 IEA amino acid transport
GO:0016021 IEA integral component of membrane
GO:0060348 IEA bone development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077081 slc38a10 solute carrier family 38, member 10 protein_coding Danio_rerio
ENSMUSG00000061306 Slc38a10 solute carrier family 38, member 10 protein_coding Mus_musculus

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