C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000288439 SLC38A10-002 ENSG00000157637 9606 - 17:81251196-81295267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverLungMuscleOvaryTestisENST00000288439
Transcript ID Bladder Brain Breast Heart Liver Lung Muscle Ovary Testis
ENST00000288439 2.049±0.00 0.850±0.00 5.411±0.00 0.972±0.00 3.152±0.00 3.202±0.00 1.969±0.00 5.185±3.09 6.747±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043W CIL_00043W_0002 CGP 17:81239239-81295547

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0006814 IEA sodium ion transport
GO:0006865 IEA amino acid transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179094 Slc38a10-201 protein_coding Mus_musculus 0 1607
ENSMUST00000045402 Slc38a10-004 protein_coding Mus_musculus 0 1607
ENSMUST00000103018 Slc38a10-001 protein_coding Mus_musculus 0 1607
ENSMUST00000053692 Slc38a10-002 protein_coding Mus_musculus 0 1317
ENSMUST00000076697 Slc38a10-003 protein_coding Mus_musculus 0 1317
ENSMUST00000150315 Slc38a10-007 processed_transcript Mus_musculus 0 449
ENSMUST00000135605 Slc38a10-005 processed_transcript Mus_musculus 0 291

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