C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 38, member 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061306 Slc38a10 10090 - 11:120103960-120151346 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045402 Slc38a10-004 120103960-120151346 protein_coding
  ENSMUST00000053692 Slc38a10-002 120123844-120151346 protein_coding
  ENSMUST00000076697 Slc38a10-003 120118872-120151346 protein_coding
  ENSMUST00000103018 Slc38a10-001 120103960-120151346 protein_coding
  ENSMUST00000124997 Slc38a10-010 120108537-120110338 processed_transcript
  ENSMUST00000129128 Slc38a10-011 120105873-120110327 processed_transcript
  ENSMUST00000129575 Slc38a10-013 120105792-120110446 processed_transcript
  ENSMUST00000129710 Slc38a10-012 120105805-120110458 processed_transcript
  ENSMUST00000132239 Slc38a10-006 120132855-120151320 processed_transcript
  ENSMUST00000135605 Slc38a10-005 120137970-120151322 processed_transcript
  ENSMUST00000146641 Slc38a10-015 120105621-120106988 processed_transcript
  ENSMUST00000148503 Slc38a10-014 120105678-120108588 processed_transcript
  ENSMUST00000150315 Slc38a10-007 120134807-120151287 processed_transcript
  ENSMUST00000152859 Slc38a10-009 120139109-120142784 processed_transcript
  ENSMUST00000154444 Slc38a10-008 120111004-120151279 processed_transcript
  ENSMUST00000179094 Slc38a10-201 120104452-120151312 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045402ENSMUST00000076697ENSMUST00000103018ENSMUST00000129575ENSMUST00000129710ENSMUST00000132239ENSMUST00000179094
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045402 N/A N/A 3.293±0.00 4.078±0.00 N/A 4.808±0.00 N/A 6.707±0.00 2.961±0.76 5.991±0.00 1.050±0.00 6.809±1.80 3.946±0.22 4.160±0.88
ENSMUST00000076697 22.003±0.88 15.781±0.91 N/A N/A 36.817±10.08 15.641±3.81 N/A 23.172±2.34 8.739±1.51 28.111±5.39 N/A 40.976±8.28 N/A 10.078±0.00
ENSMUST00000103018 N/A N/A N/A 4.777±0.00 N/A N/A N/A N/A N/A N/A 1.383±0.00 N/A N/A N/A
ENSMUST00000129575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 101.308±0.00 46.490±5.44 59.800±0.00
ENSMUST00000129710 N/A N/A N/A 35.514±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132239 N/A N/A N/A N/A 52.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179094 29.153±4.41 12.703±4.56 9.662±3.62 16.120±7.77 21.989±10.79 15.617±4.92 19.263±5.44 24.148±9.89 10.466±5.24 29.148±2.55 3.334±0.94 28.904±7.63 23.055±7.19 9.594±2.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043W CIL_00043W_0003 CGP 11:120098928-120151346
CIL_0005H6 CIL_0005H6_0002 CGP 11:120103960-120292296

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005794 IEA Golgi apparatus
GO:0006814 IEA sodium ion transport
GO:0006865 IEA amino acid transport
GO:0016021 IEA integral component of membrane
GO:0060348 IMP bone development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077081 slc38a10 solute carrier family 38, member 10 protein_coding Danio_rerio
ENSG00000157637 SLC38A10 solute carrier family 38, member 10 protein_coding Homo_sapiens

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