C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pantothenate kinase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157881 PANK4 9606 - 1:2508533-2526600 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378466 PANK4-001 2508533-2526600 protein_coding
  ENST00000435556 PANK4-008 2508537-2526596 protein_coding
  ENST00000468002 PANK4-004 2514433-2519295 nonsense_mediated_decay
  ENST00000471361 PANK4-003 2510293-2513013 retained_intron
  ENST00000486396 PANK4-005 2519204-2526575 nonsense_mediated_decay
  ENST00000487804 PANK4-002 2512406-2514085 retained_intron
  ENST00000491212 PANK4-006 2521261-2526187 processed_transcript
  ENST00000502512 PANK4-012 2509793-2514403 nonsense_mediated_decay
  ENST00000502770 PANK4-007 2520840-2526596 nonsense_mediated_decay
  ENST00000505228 PANK4-009 2508795-2520901 nonsense_mediated_decay
  ENST00000514922 PANK4-010 2521367-2526597 retained_intron
  ENST00000515423 PANK4-011 2514413-2515937 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378466ENST00000435556ENST00000468002ENST00000471361ENST00000486396ENST00000502512ENST00000505228ENST00000515423
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378466 3.726±0.00 N/A N/A 1.416±0.00 1.189±0.00 1.698±1.32 4.182±3.67 3.406±2.46 2.978±0.00 10.021±0.00 9.736±6.09 5.409±3.83 8.078±2.40 3.986±1.54
ENST00000435556 N/A 1.161±0.00 N/A 3.494±0.00 1.650±0.15 2.364±0.00 0.303±0.00 1.379±0.00 0.637±0.00 N/A N/A 2.558±0.00 4.963±0.00 1.844±0.00
ENST00000468002 N/A N/A 1.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.773±0.00 N/A N/A
ENST00000471361 N/A N/A 0.748±0.00 N/A N/A N/A N/A N/A N/A 1.491±0.00 N/A 0.866±0.00 N/A N/A
ENST00000486396 4.828±0.00 4.332±0.00 N/A 6.437±0.00 2.948±0.00 5.180±0.00 N/A N/A N/A N/A N/A N/A N/A 3.210±0.00
ENST00000502512 N/A N/A N/A N/A 1.133±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505228 N/A 2.518±0.00 0.355±0.00 N/A 1.094±0.44 2.436±0.00 3.797±0.00 3.781±0.00 1.397±0.00 N/A N/A 2.968±0.54 2.833±0.58 3.243±0.14
ENST00000515423 N/A N/A 1.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.660±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0001 VISTA 1:1910870-2513425

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004594 IEA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0015937 IEA coenzyme A biosynthetic process
GO:0016310 IEA phosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040238 pank4 pantothenate kinase 4 protein_coding Danio_rerio
ENSMUSG00000029056 Pank4 pantothenate kinase 4 protein_coding Mus_musculus

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