C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435556 PANK4-008 ENSG00000157881 9606 - 1:2508537-2526596 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000435556
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000435556 1.161±0.00 3.494±0.00 1.650±0.15 2.364±0.00 0.303±0.00 1.379±0.00 0.637±0.00 2.558±0.00 4.963±0.00 1.844±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0001 VISTA 1:1910870-2513425

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IEA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0015937 IEA coenzyme A biosynthetic process
GO:0016310 IEA phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030931 Pank4-001 protein_coding Mus_musculus 0 1838
ENSMUST00000070953 Pank4-002 protein_coding Mus_musculus 0 1648
ENSMUST00000148934 Pank4-003 nonsense_mediated_decay Mus_musculus 0 1304
ENSMUST00000105632 Pank4-004 retained_intron Mus_musculus 0 1127
ENSDART00000124139 pank4-201 protein_coding Danio_rerio 0 750
ENSMUST00000128297 Pank4-007 retained_intron Mus_musculus 0 540
ENSMUST00000129386 Pank4-005 retained_intron Mus_musculus 0 492
ENSMUST00000148299 Pank4-006 retained_intron Mus_musculus 0 492

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