C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pantothenate kinase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029056 Pank4 10090 + 4:154964123-154980938 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030931 Pank4-001 154964123-154980871 protein_coding
  ENSMUST00000070953 Pank4-002 154964133-154980938 protein_coding
  ENSMUST00000105632 Pank4-004 154974533-154980938 retained_intron
  ENSMUST00000128297 Pank4-007 154976279-154979224 retained_intron
  ENSMUST00000129386 Pank4-005 154976578-154980934 retained_intron
  ENSMUST00000148299 Pank4-006 154976271-154979154 retained_intron
  ENSMUST00000148934 Pank4-003 154969999-154980889 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030931ENSMUST00000105632ENSMUST00000129386ENSMUST00000148934
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030931 7.724±0.78 12.262±4.43 10.637±0.16 9.738±4.21 8.109±3.79 8.307±2.05 12.937±2.28 7.296±1.55 7.267±3.76 7.614±2.45 9.308±1.65 12.545±4.62 4.284±2.95 2.620±1.41
ENSMUST00000105632 10.690±0.20 6.238±2.30 6.715±0.00 11.343±3.30 11.765±3.06 7.008±1.79 7.172±0.62 5.744±1.40 6.304±3.91 9.292±3.23 N/A 19.667±7.23 1.335±0.00 2.227±0.00
ENSMUST00000129386 N/A N/A N/A N/A 5.720±0.00 N/A N/A N/A N/A N/A N/A N/A 1.651±0.00 N/A
ENSMUST00000148934 4.581±0.25 2.938±0.00 N/A 5.710±0.82 5.818±0.12 3.397±1.05 4.483±0.13 3.051±0.52 6.737±0.49 4.294±0.86 4.502±0.07 5.387±1.40 2.282±0.49 1.870±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XZ CIL_0007XZ_0002 VISTA 4:154471105-155072345
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004594 IEA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0015937 IEA coenzyme A biosynthetic process
GO:0016310 IEA phosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040238 pank4 pantothenate kinase 4 protein_coding Danio_rerio
ENSG00000157881 PANK4 pantothenate kinase 4 protein_coding Homo_sapiens

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