C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H2bd
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158373 HIST1H2BD 9606 + 6:26158146-26171349 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000289316 HIST1H2BD-001 26158146-26171349 protein_coding
  ENST00000377777 HIST1H2BD-002 26158146-26158641 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000289316ENST00000377777
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000289316 0.298±0.00 N/A 2.581±0.00 1.918±0.46 2.149±0.00 9.445±0.00 8.033±4.30 4.666±1.96 16.102±0.00 4.710±0.00 2.939±0.51 9.591±3.76 7.825±2.77 4.924±0.54
ENST00000377777 0.821±0.00 31.389±0.00 27.085±0.00 9.584±7.68 37.930±36.54 60.927±56.78 13.671±0.00 21.386±0.00 51.497±0.00 38.253±25.87 1.603±0.00 43.477±36.77 3.253±0.00 2.414±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C0 CIL_0001C0_0003 CGP 6:26156391-26171349

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034203 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051726 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000051778 zgc:194989 zgc:194989 protein_coding Danio_rerio
ENSDARG00000068996 hist2h2l histone 2, H2, like protein_coding Danio_rerio
ENSDARG00000070289 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000076129 CABZ01086354.1 Histone H2B protein_coding Danio_rerio
ENSDARG00000078724 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000078941 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000086591 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000087854 ano9a anoctamin 9a protein_coding Danio_rerio
ENSDARG00000088028 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000092743 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSDARG00000093195 si:dkey-261m9.6 si:dkey-261m9.6 protein_coding Danio_rerio
ENSDARG00000093756 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094610 wu:fe11b02 wu:fe11b02 protein_coding Danio_rerio
ENSDARG00000094744 zgc:171759 zgc:171759 protein_coding Danio_rerio
ENSMUSG00000096807 Hist1h2bm histone cluster 1, H2bm protein_coding Mus_musculus

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