C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: erythrocyte membrane protein band 4.1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159023 EPB41 9606 + 1:28887091-29120046 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343067 EPB41-201 28887091-29120046 protein_coding
  ENST00000347529 EPB41-005 28887172-29117114 protein_coding
  ENST00000349460 EPB41-004 28887124-29117114 protein_coding
  ENST00000356093 EPB41-202 28887091-29120046 protein_coding
  ENST00000373797 EPB41-002 28914579-29065221 protein_coding
  ENST00000373798 EPB41-001 28893741-29120046 protein_coding
  ENST00000373800 EPB41-003 28887124-29117114 protein_coding
  ENST00000460378 EPB41-006 29096232-29120038 processed_transcript
  ENST00000462032 EPB41-009 29097587-29109738 processed_transcript
  ENST00000482464 EPB41-007 28887121-28993456 processed_transcript
  ENST00000488277 EPB41-010 29058604-29097849 processed_transcript
  ENST00000490308 EPB41-008 29064957-29109358 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343067ENST00000347529ENST00000356093ENST00000373798ENST00000460378
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.671±0.00 N/A
ENST00000347529 0.848±0.00 N/A N/A N/A 0.604±0.00 N/A 2.428±0.00 3.661±0.00 N/A N/A N/A N/A
ENST00000356093 0.819±0.00 0.728±0.25 N/A 1.360±0.00 0.836±0.00 0.411±0.00 1.746±0.00 1.256±0.00 1.525±0.00 6.695±2.67 1.749±0.03 N/A
ENST00000373798 N/A N/A 1.213±0.00 N/A N/A 0.675±0.00 N/A 1.879±0.00 N/A N/A N/A 6.861±0.00
ENST00000460378 N/A 0.376±0.00 N/A N/A N/A 0.922±0.00 N/A N/A 0.713±0.00 7.979±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0001 VISTA 1:28583201-29186892

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005545 IDA 1-phosphatidylinositol binding
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0005886 TAS plasma membrane
GO:0008015 TAS blood circulation
GO:0008091 TAS spectrin
GO:0008092 IEA cytoskeletal protein binding
GO:0014731 TAS spectrin-associated cytoskeleton
GO:0016020 IEA membrane
GO:0019898 IEA extrinsic component of membrane
GO:0030036 NAS actin cytoskeleton organization
GO:0030507 TAS spectrin binding
GO:0030863 IDA cortical cytoskeleton
GO:0030866 IEA cortical actin cytoskeleton organization
GO:0032092 IDA positive regulation of protein binding
GO:0043234 IDA protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070585 epb41a erythrocyte membrane protein band 4.1a (elliptocytosis 1, RH-linked) protein_coding Danio_rerio
ENSMUSG00000028906 Epb4.1 erythrocyte protein band 4.1 protein_coding Mus_musculus

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