C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erythrocyte membrane protein band 4.1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000347529 EPB41-005 ENSG00000159023 9606 + 1:28887172-29117114 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLiverLungENST00000347529
Transcript ID Bladder Heart Liver Lung
ENST00000347529 0.848±0.00 0.604±0.00 2.428±0.00 3.661±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0001 VISTA 1:28583201-29186892

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005545 IDA 1-phosphatidylinositol binding
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0005886 TAS plasma membrane
GO:0008015 TAS blood circulation
GO:0008091 TAS spectrin
GO:0008092 IEA cytoskeletal protein binding
GO:0014731 TAS spectrin-associated cytoskeleton
GO:0019898 IEA extrinsic component of membrane
GO:0030036 NAS actin cytoskeleton organization
GO:0030507 TAS spectrin binding
GO:0030863 IDA cortical cytoskeleton
GO:0030866 IEA cortical actin cytoskeleton organization
GO:0032092 IDA positive regulation of protein binding
GO:0043234 IDA protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105974 Epb4.1-005 protein_coding Mus_musculus 0 2728
ENSMUST00000084253 Epb4.1-202 protein_coding Mus_musculus 0 2065
ENSMUST00000146021 Epb4.1-004 processed_transcript Mus_musculus 0 2065
ENSMUST00000054917 Epb4.1-007 protein_coding Mus_musculus 0 2065
ENSMUST00000030739 Epb4.1-201 protein_coding Mus_musculus 0 1221
ENSMUST00000105981 Epb4.1-203 protein_coding Mus_musculus 0 1221
ENSMUST00000141291 Epb4.1-006 protein_coding Mus_musculus 0 1221
ENSMUST00000105972 Epb4.1-001 protein_coding Mus_musculus 0 1221
ENSMUST00000144754 Epb4.1-002 processed_transcript Mus_musculus 0 1221
ENSMUST00000105975 Epb4.1-008 protein_coding Mus_musculus 0 1221
ENSMUST00000105970 Epb4.1-003 protein_coding Mus_musculus 0 1221
ENSMUST00000137846 Epb4.1-010 protein_coding Mus_musculus 0 1221
ENSMUST00000146443 Epb4.1-014 protein_coding Mus_musculus 0 856
ENSMUST00000135579 Epb4.1-009 protein_coding Mus_musculus 0 640
ENSMUST00000151746 Epb4.1-011 processed_transcript Mus_musculus 0 640
ENSMUST00000155990 Epb4.1-015 protein_coding Mus_musculus 0 627
ENSMUST00000131953 Epb4.1-012 processed_transcript Mus_musculus 0 540
ENSMUST00000136761 Epb4.1-013 processed_transcript Mus_musculus 0 484
ENSMUST00000080208 Epb4.1l3-201 protein_coding Mus_musculus 1e-31 143
ENSMUST00000112680 Epb4.1l3-202 protein_coding Mus_musculus 1e-31 143

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