C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erythrocyte membrane protein band 4.1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356093 EPB41-202 ENSG00000159023 9606 + 1:28887091-29120046 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000356093
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000356093 0.819±0.00 0.728±0.25 1.360±0.00 0.836±0.00 0.411±0.00 1.746±0.00 1.256±0.00 1.525±0.00 6.695±2.67 1.749±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0001 VISTA 1:28583201-29186892

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005198 IEA structural molecule activity
GO:0005856 IEA cytoskeleton
GO:0008092 IEA cytoskeletal protein binding
GO:0030866 IEA cortical actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137846 Epb4.1-010 protein_coding Mus_musculus 0 2462
ENSMUST00000146021 Epb4.1-004 processed_transcript Mus_musculus 0 2078
ENSMUST00000105970 Epb4.1-003 protein_coding Mus_musculus 0 2013
ENSMUST00000030739 Epb4.1-201 protein_coding Mus_musculus 0 2006
ENSMUST00000084253 Epb4.1-202 protein_coding Mus_musculus 0 2006
ENSMUST00000105981 Epb4.1-203 protein_coding Mus_musculus 0 2006
ENSMUST00000141291 Epb4.1-006 protein_coding Mus_musculus 0 2006
ENSMUST00000054917 Epb4.1-007 protein_coding Mus_musculus 0 2006
ENSMUST00000105972 Epb4.1-001 protein_coding Mus_musculus 0 1995
ENSMUST00000144754 Epb4.1-002 processed_transcript Mus_musculus 0 1491
ENSMUST00000105975 Epb4.1-008 protein_coding Mus_musculus 0 1491
ENSMUST00000105974 Epb4.1-005 protein_coding Mus_musculus 0 1221
ENSMUST00000146443 Epb4.1-014 protein_coding Mus_musculus 0 987
ENSMUST00000135579 Epb4.1-009 protein_coding Mus_musculus 0 656
ENSMUST00000151746 Epb4.1-011 processed_transcript Mus_musculus 0 656
ENSMUST00000155990 Epb4.1-015 protein_coding Mus_musculus 0 643
ENSMUST00000136761 Epb4.1-013 processed_transcript Mus_musculus 0 603
ENSMUST00000131953 Epb4.1-012 processed_transcript Mus_musculus 0 540
ENSMUST00000080208 Epb4.1l3-201 protein_coding Mus_musculus 2e-31 143
ENSMUST00000112680 Epb4.1l3-202 protein_coding Mus_musculus 2e-31 143
ENSMUST00000094662 Gm10300-201 protein_coding Mus_musculus 1e-29 137
ENSMUST00000053748 Epb4.1l2-201 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000092645 Epb4.1l2-202 protein_coding Mus_musculus 0.00000000002 77

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