C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: erythrocyte protein band 4.1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028906 Epb4.1 10090 - 4:131923413-132075321 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030739 Epb4.1-201 131923429-132072097 protein_coding
  ENSMUST00000054917 Epb4.1-007 131923413-132007437 protein_coding
  ENSMUST00000084253 Epb4.1-202 131923429-132049078 protein_coding
  ENSMUST00000105970 Epb4.1-003 131923413-132075292 protein_coding
  ENSMUST00000105972 Epb4.1-001 131926510-132007431 protein_coding
  ENSMUST00000105974 Epb4.1-005 131923413-132007438 protein_coding
  ENSMUST00000105975 Epb4.1-008 131923413-132075292 protein_coding
  ENSMUST00000105981 Epb4.1-203 131923429-132049078 protein_coding
  ENSMUST00000131953 Epb4.1-012 132003776-132075264 processed_transcript
  ENSMUST00000135579 Epb4.1-009 131923413-131967876 protein_coding
  ENSMUST00000136761 Epb4.1-013 131989551-132000304 processed_transcript
  ENSMUST00000137846 Epb4.1-010 131923413-132003794 protein_coding
  ENSMUST00000141291 Epb4.1-006 131957620-132049091 protein_coding
  ENSMUST00000144754 Epb4.1-002 131924129-132072097 processed_transcript
  ENSMUST00000146021 Epb4.1-004 131923413-132075321 processed_transcript
  ENSMUST00000146443 Epb4.1-014 131923413-131967845 protein_coding
  ENSMUST00000151746 Epb4.1-011 131923413-131937387 processed_transcript
  ENSMUST00000155990 Epb4.1-015 131923413-131937211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054917ENSMUST00000084253ENSMUST00000105972ENSMUST00000105981ENSMUST00000131953ENSMUST00000135579ENSMUST00000137846ENSMUST00000146021ENSMUST00000146443ENSMUST00000151746ENSMUST00000155990
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.840±0.00 5.291±0.14 8.799±0.15 N/A
ENSMUST00000084253 N/A 2.273±0.00 N/A 11.929±1.66 N/A N/A N/A N/A N/A 5.346±2.11 N/A 3.527±1.33 N/A 0.696±0.00
ENSMUST00000105972 N/A N/A N/A 6.362±0.00 N/A N/A N/A N/A N/A N/A N/A 6.412±0.00 20.287±3.69 N/A
ENSMUST00000105981 N/A N/A N/A 3.860±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131953 N/A N/A N/A 17.324±0.00 N/A N/A N/A N/A N/A N/A N/A 38.769±0.00 135.767±1.15 4.854±0.00
ENSMUST00000135579 3.531±1.17 2.669±0.35 16.835±1.52 2.297±0.00 3.519±0.69 8.446±1.01 4.707±0.58 18.846±2.11 9.633±1.01 5.535±2.12 6.192±0.78 2.634±0.56 9.680±4.85 0.896±0.00
ENSMUST00000137846 4.880±1.28 6.358±1.21 4.563±0.00 5.262±0.00 7.278±1.55 7.535±0.81 10.840±3.40 11.138±1.89 21.631±16.57 8.291±2.25 5.243±0.56 2.761±0.88 6.857±1.78 N/A
ENSMUST00000146021 2.009±0.00 N/A 5.549±0.00 N/A N/A 2.074±0.00 5.267±1.15 5.685±0.26 30.020±19.36 N/A 4.870±1.24 1.617±0.00 7.809±1.93 N/A
ENSMUST00000146443 N/A N/A N/A 16.195±5.30 N/A N/A N/A N/A 22.668±8.35 3.889±0.75 N/A 3.307±1.11 15.188±0.00 2.436±0.00
ENSMUST00000151746 N/A N/A N/A 1.664±0.00 N/A N/A N/A N/A N/A 2.378±0.00 N/A 1.616±0.19 N/A N/A
ENSMUST00000155990 N/A N/A N/A 4.401±0.00 N/A N/A N/A N/A N/A N/A 5.675±1.55 8.965±0.00 23.534±0.00 0.819±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005545 IEA 1-phosphatidylinositol binding
GO:0005634 IEA nucleus
GO:0008360 ISS regulation of cell shape
GO:0015629 ISS actin cytoskeleton
GO:0016020 IDA membrane
GO:0019898 IEA extrinsic component of membrane
GO:0030036 ISS actin cytoskeleton organization
GO:0030507 ISS spectrin binding
GO:0030863 IDA cortical cytoskeleton
GO:0030866 IEA cortical actin cytoskeleton organization
GO:0032092 IGI positive regulation of protein binding
GO:0043234 IEA protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070585 epb41a erythrocyte membrane protein band 4.1a (elliptocytosis 1, RH-linked) protein_coding Danio_rerio
ENSG00000159023 EPB41 erythrocyte membrane protein band 4.1 protein_coding Homo_sapiens

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