C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor necrosis factor receptor superfamily, member 13C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159958 TNFRSF13C 9606 - 22:41925041-41926818 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291232 TNFRSF13C-001 41925041-41926818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000291232
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000291232 0.174±0.00 26.927±0.00 0.297±0.12 0.429±0.14 0.423±0.00 0.109±0.07 0.357±0.00 0.435±0.00 1.032±0.51 0.674±0.85 0.221±0.00 0.495±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BF CIL_0004BF_0001 CGP 22:41909554-41926818
CIL_0004BG CIL_0004BG_0001 CGP 22:41925041-41947164

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001782 IEA B cell homeostasis
GO:0002636 IEA positive regulation of germinal center formation
GO:0009897 IEA external side of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030890 IEA positive regulation of B cell proliferation
GO:0031295 IEA T cell costimulation
GO:0031296 IEA B cell costimulation
GO:0042102 IEA positive regulation of T cell proliferation
GO:0045078 IEA positive regulation of interferon-gamma biosynthetic process
GO:0050776 IEA regulation of immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000068105 Tnfrsf13c tumor necrosis factor receptor superfamily, member 13c protein_coding Mus_musculus

Loading