C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004BF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000234965-ENSG00000159958 CGP 9606 22:41909554-41926818
GeneTranscriptPositionBiotype
ENSG00000159958 (TNFRSF13C)
tumor necrosis factor receptor superfamily, member 13C
ENST00000291232 (TNFRSF13C-001) 41925041-41926818 protein_coding
ENSG00000234965 (SHISA8)
shisa family member 8
ENST00000457093 (SHISA8-001) 41911293-41914566 protein_coding
ENST00000621082 (SHISA8-201) 41909554-41914667 protein_coding
ENSG00000260655 (CTA-250D10.23)
ENST00000566575 (CTA-250D10.23-001) 41922023-41923100 lincRNA
ENSG00000263463 (MIR378I)
microRNA 378i
ENST00000582688 (MIR378I-201) 41923222-41923297 miRNA
CIL_0004BF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000096883-ENSMUSG00000068105 CGP 10090 15:82206952-82224339
GeneTranscriptPositionBiotype
ENSMUSG00000068105 (Tnfrsf13c)
tumor necrosis factor receptor superfamily, member 13c
ENSMUST00000089161 (Tnfrsf13c-201) 82221744-82224336 protein_coding
ENSMUST00000109535 (Tnfrsf13c-202) 82221745-82224339 protein_coding
ENSMUSG00000096883 (AI848285)
shisa family member 8
ENSMUST00000179269 (AI848285-201) 82206952-82212815 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BF_0001ENSG00000159958ENST00000291232ENSG00000234965ENST00000457093ENST00000621082ENSG00000260655ENST00000566575ENSG00000263463ENST00000582688CIL_0004BF_0002ENSMUSG00000068105ENSMUST00000089161ENSMUST00000109535ENSMUSG00000096883ENSMUST00000179269
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BF_0001ENSG00000159958ENST00000291232ENSG00000234965ENST00000457093ENST00000621082ENSG00000260655ENST00000566575ENSG00000263463ENST00000582688CIL_0004BF_0002ENSMUSG00000068105ENSMUST00000089161ENSMUST00000109535ENSMUSG00000096883ENSMUST00000179269
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159958 ENST00000291232 0.174±0.00 26.927±0.00 N/A 0.297±0.12 0.429±0.14 0.423±0.00 0.109±0.07 0.357±0.00 0.435±0.00 1.032±0.51 N/A 0.674±0.85 0.221±0.00 0.495±0.42
ENSG00000234965 ENST00000457093 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.825±0.00 N/A 0.458±0.00 N/A N/A
ENST00000621082 N/A 1.331±0.00 N/A 0.334±0.09 0.059±0.00 N/A 1.604±0.00 0.239±0.00 N/A N/A N/A N/A 0.101±0.01 0.098±0.00
ENSG00000260655 ENST00000566575 0.015±0.00 52.224±0.00 N/A 0.198±0.04 0.279±0.00 0.141±0.00 0.101±0.00 0.121±0.00 0.065±0.00 0.714±0.26 0.056±0.00 0.381±0.35 0.122±0.03 0.419±0.05
ENSG00000263463 ENST00000582688 N/A 76.288±0.00 N/A 1.280±0.00 N/A N/A N/A N/A N/A 2.235±0.00 N/A N/A N/A 0.376±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000068105 ENSMUST00000089161 0.110±0.04 0.067±0.02 N/A N/A 9.650±5.40 0.776±0.28 0.192±0.12 0.370±0.35 0.270±0.27 0.831±0.20 0.333±0.44 0.108±0.04 0.046±0.03 N/A
ENSMUST00000109535 0.040±0.03 N/A 0.027±0.00 0.011±0.00 4.841±0.06 0.254±0.03 0.028±0.00 0.105±0.07 0.086±0.06 0.399±0.10 0.051±0.00 0.136±0.04 N/A 3.220±1.30
ENSMUSG00000096883 ENSMUST00000179269 0.150±0.04 0.450±0.10 0.045±0.00 1.489±0.54 1.256±0.63 0.152±0.07 0.118±0.05 0.050±0.02 0.183±0.14 0.221±0.12 0.106±0.07 8.399±4.54 0.207±0.10 0.263±0.14

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