C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004BG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159958-ENSG00000100162 CGP 9606 22:41925041-41947164
GeneTranscriptPositionBiotype
ENSG00000100162 (CENPM)
centromere protein M
ENST00000215980 (CENPM-001) 41938721-41947164 protein_coding
ENST00000396437 (CENPM-010) 41944921-41947151 retained_intron
ENST00000402338 (CENPM-004) 41938737-41946693 protein_coding
ENST00000402420 (CENPM-002) 41939172-41946729 protein_coding
ENST00000404067 (CENPM-005) 41938737-41946688 protein_coding
ENST00000407253 (CENPM-008) 41938749-41947136 protein_coding
ENST00000460824 (CENPM-007) 41946308-41947133 retained_intron
ENST00000472374 (CENPM-003) 41938737-41940219 protein_coding
ENSG00000159958 (TNFRSF13C)
tumor necrosis factor receptor superfamily, member 13C
ENST00000291232 (TNFRSF13C-001) 41925041-41926818 protein_coding
CIL_0004BG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068105-ENSMUSG00000068101 CGP 10090 15:82221744-82244747
GeneTranscriptPositionBiotype
ENSMUSG00000068101 (Cenpm)
centromere protein M
ENSMUST00000089155 (Cenpm-201) 82233779-82244747 protein_coding
ENSMUST00000089157 (Cenpm-202) 82233779-82244747 protein_coding
ENSMUSG00000068105 (Tnfrsf13c)
tumor necrosis factor receptor superfamily, member 13c
ENSMUST00000089161 (Tnfrsf13c-201) 82221744-82224336 protein_coding
ENSMUST00000109535 (Tnfrsf13c-202) 82221745-82224339 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BG_0001ENSG00000100162ENST00000215980ENST00000396437ENST00000402338ENST00000402420ENST00000404067ENST00000407253ENST00000460824ENST00000472374ENSG00000159958ENST00000291232CIL_0004BG_0002ENSMUSG00000068101ENSMUST00000089155ENSMUST00000089157ENSMUSG00000068105ENSMUST00000089161ENSMUST00000109535
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BG_0001ENSG00000100162ENST00000215980ENST00000396437ENST00000402338ENST00000402420ENST00000404067ENST00000407253ENST00000460824ENST00000472374ENSG00000159958ENST00000291232CIL_0004BG_0002ENSMUSG00000068101ENSMUST00000089155ENSMUST00000089157ENSMUSG00000068105ENSMUST00000089161ENSMUST00000109535
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100162 ENST00000215980 0.262±0.00 N/A N/A 0.232±0.00 0.533±0.00 0.451±0.23 N/A 0.240±0.00 N/A N/A N/A 4.293±2.15 5.710±1.96 3.755±0.73
ENST00000396437 0.111±0.00 0.636±0.00 0.300±0.00 0.125±0.00 1.190±0.00 1.643±0.00 0.082±0.00 0.331±0.00 N/A N/A N/A N/A N/A 0.937±0.00
ENST00000402338 N/A 1.300±0.00 N/A N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A 4.023±0.00 N/A 1.500±0.61
ENST00000402420 N/A N/A N/A N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A N/A N/A
ENST00000404067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.684±0.00 N/A N/A
ENST00000407253 N/A N/A N/A N/A 0.606±0.00 0.506±0.00 N/A N/A N/A 0.978±0.00 N/A 13.651±0.00 1.744±0.00 2.650±0.00
ENST00000460824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.880±0.00 N/A N/A
ENST00000472374 N/A 2.906±0.00 N/A 0.324±0.00 N/A 0.505±0.00 N/A N/A N/A 3.617±0.00 0.134±0.00 1.133±0.00 N/A N/A
ENSG00000159958 ENST00000291232 0.174±0.00 26.927±0.00 N/A 0.297±0.12 0.429±0.14 0.423±0.00 0.109±0.07 0.357±0.00 0.435±0.00 1.032±0.51 N/A 0.674±0.85 0.221±0.00 0.495±0.42
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000068101 ENSMUST00000089155 0.390±0.17 N/A N/A 0.415±0.00 0.188±0.00 1.966±0.00 0.062±0.00 N/A N/A 0.321±0.00 0.255±0.00 2.311±0.79 0.761±0.40 0.418±0.00
ENSMUST00000089157 2.280±1.22 4.627±0.47 1.386±0.21 5.394±2.00 2.242±1.41 8.266±1.38 0.322±0.19 0.877±0.17 8.651±5.37 1.086±0.13 0.027±0.00 10.200±5.17 3.051±2.68 4.221±0.70
ENSMUSG00000068105 ENSMUST00000089161 0.110±0.04 0.067±0.02 N/A N/A 9.650±5.40 0.776±0.28 0.192±0.12 0.370±0.35 0.270±0.27 0.831±0.20 0.333±0.44 0.108±0.04 0.046±0.03 N/A
ENSMUST00000109535 0.040±0.03 N/A 0.027±0.00 0.011±0.00 4.841±0.06 0.254±0.03 0.028±0.00 0.105±0.07 0.086±0.06 0.399±0.10 0.051±0.00 0.136±0.04 N/A 3.220±1.30

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