C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160075 SSU72 9606 - 1:1541673-1574869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291386 SSU72-001 1541673-1574869 protein_coding
  ENST00000359060 SSU72-003 1560848-1574584 protein_coding
  ENST00000378725 SSU72-004 1544638-1574587 retained_intron
  ENST00000378726 SSU72-002 1541674-1546487 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000291386ENST00000359060
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000291386 57.433±0.00 82.192±0.00 10.574±0.00 53.583±28.33 44.427±31.78 36.697±22.51 30.098±22.34 46.327±29.40 26.074±15.84 32.500±21.78 71.889±36.82 77.259±42.57 72.497±4.06 54.677±13.69
ENST00000359060 6.131±0.00 10.083±0.00 0.839±0.00 N/A 5.653±4.81 1.602±0.47 1.960±0.00 3.466±1.81 3.217±2.47 3.316±2.24 N/A 8.245±6.72 3.806±1.00 3.929±1.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006378 IMP mRNA polyadenylation
GO:0006397 IEA mRNA processing
GO:0008420 IDA CTD phosphatase activity
GO:0070940 IDA dephosphorylation of RNA polymerase II C-terminal domain

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031216 ssu72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000029038 Ssu72 Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) protein_coding Mus_musculus

Loading