C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359060 SSU72-003 ENSG00000160075 9606 - 1:1560848-1574584 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000359060
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000359060 6.131±0.00 10.083±0.00 0.839±0.00 5.653±4.81 1.602±0.47 1.960±0.00 3.466±1.81 3.217±2.47 3.316±2.24 8.245±6.72 3.806±1.00 3.929±1.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006378 IMP mRNA polyadenylation
GO:0006397 IEA mRNA processing
GO:0008420 IDA CTD phosphatase activity
GO:0070940 IDA dephosphorylation of RNA polymerase II C-terminal domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140322 Ssu72-003 retained_intron Mus_musculus 0 324
ENSMUST00000105595 Ssu72-002 protein_coding Mus_musculus 0 311
ENSMUST00000030905 Ssu72-001 protein_coding Mus_musculus 0 311

Loading