C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin associated and SH3 domain containing A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160185 UBASH3A 9606 + 21:42403899-42447681 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291535 UBASH3A-002 42403899-42447243 protein_coding
  ENST00000319294 UBASH3A-001 42403915-42447681 protein_coding
  ENST00000398367 UBASH3A-003 42403917-42447243 protein_coding
  ENST00000473381 UBASH3A-004 42403917-42447530 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000291535ENST00000319294ENST00000398367ENST00000473381
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000291535 N/A N/A N/A N/A 0.561±0.00 N/A N/A N/A 0.496±0.20 N/A 0.057±0.00 N/A
ENST00000319294 2.469±0.00 N/A N/A N/A 0.025±0.00 N/A 0.042±0.00 0.038±0.00 N/A 0.205±0.08 0.287±0.00 N/A
ENST00000398367 N/A 0.061±0.00 0.058±0.00 0.060±0.00 N/A 0.031±0.02 N/A 0.042±0.00 N/A 0.027±0.00 0.111±0.00 N/A
ENST00000473381 0.643±0.00 N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A 0.195±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0001 VISTA 21:42290762-42894212
CIL_00036C CIL_00036C_0001 CGP 21:42371890-42447681
CIL_00036D CIL_00036D_0001 CGP 21:42403899-42496354

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001817 IEA regulation of cytokine production
GO:0003824 IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 IDA cytosol
GO:0008152 IEA metabolic process
GO:0050860 IEA negative regulation of T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000042345 Ubash3a ubiquitin associated and SH3 domain containing, A protein_coding Mus_musculus

Loading