C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00036D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160185-ENSG00000160188 CGP 9606 21:42403899-42496354
GeneTranscriptPositionBiotype
ENSG00000160185 (UBASH3A)
ubiquitin associated and SH3 domain containing A 		ENST00000291535 (UBASH3A-002) 42403899-42447243 protein_coding
ENST00000319294 (UBASH3A-001) 42403915-42447681 protein_coding
ENST00000398367 (UBASH3A-003) 42403917-42447243 protein_coding
ENST00000473381 (UBASH3A-004) 42403917-42447530 retained_intron
ENSG00000160188 (RSPH1)
radial spoke head 1 homolog (Chlamydomonas) 		ENST00000291536 (RSPH1-001) 42472486-42496354 protein_coding
ENST00000398352 (RSPH1-003) 42472697-42496186 protein_coding
ENST00000493019 (RSPH1-002) 42472486-42496246 retained_intron
ENSG00000160190 (SLC37A1)
solute carrier family 37 (glucose-6-phosphate transporter), member 1 		ENST00000352133 (SLC37A1-004) 42513914-42581440 protein_coding
ENST00000398341 (SLC37A1-001) 42499632-42581440 protein_coding
ENST00000398343 (SLC37A1-005) 42514524-42518510 protein_coding
ENST00000419522 (SLC37A1-002) 42496018-42518510 protein_coding
ENST00000454800 (SLC37A1-009) 42496008-42498203 processed_transcript
ENST00000471277 (SLC37A1-003) 42513892-42526038 processed_transcript
ENST00000484887 (SLC37A1-006) 42499707-42502974 processed_transcript
ENST00000487951 (SLC37A1-007) 42543517-42547717 retained_intron
ENST00000496416 (SLC37A1-008) 42565827-42575947 processed_transcript
ENSG00000252619 (RNU6-1149P)
RNA, U6 small nuclear 1149, pseudogene 		ENST00000516810 (RNU6-1149P-201) 42417497-42417593 snRNA
CIL_00036D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042345-ENSMUSG00000024033 CGP 10090 17:31207873-31277356
GeneTranscriptPositionBiotype
ENSMUSG00000024033 (Rsph1)
radial spoke head 1 homolog (Chlamydomonas) 		ENSMUST00000024832 (Rsph1-201) 31255019-31277356 protein_coding
ENSMUSG00000042345 (Ubash3a)
ubiquitin associated and SH3 domain containing, A 		ENSMUST00000048656 (Ubash3a-001) 31207873-31242202 protein_coding
ENSMUST00000144772 (Ubash3a-003) 31208080-31216231 nonsense_mediated_decay
ENSMUST00000147686 (Ubash3a-004) 31212297-31217982 processed_transcript
ENSMUST00000151620 (Ubash3a-002) 31212113-31242202 processed_transcript
ENSMUST00000173776 (Ubash3a-005) 31208089-31213897 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036D_0001ENSG00000160185ENST00000291535ENST00000319294ENST00000398367ENST00000473381ENSG00000160188ENST00000291536ENST00000398352ENST00000493019ENSG00000160190ENST00000352133ENST00000398341ENST00000398343ENST00000419522ENST00000454800ENST00000471277ENST00000484887ENST00000487951ENST00000496416ENSG00000252619ENST00000516810CIL_00036D_0002ENSMUSG00000024033ENSMUST00000024832ENSMUSG00000042345ENSMUST00000048656ENSMUST00000144772ENSMUST00000147686ENSMUST00000151620ENSMUST00000173776
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036D_0001ENSG00000160185ENST00000291535ENST00000319294ENST00000398367ENST00000473381ENSG00000160188ENST00000291536ENST00000398352ENST00000493019ENSG00000160190ENST00000352133ENST00000398341ENSG00000252619ENST00000516810CIL_00036D_0002ENSMUSG00000024033ENSMUST00000024832ENSMUSG00000042345ENSMUST00000048656ENSMUST00000144772ENSMUST00000147686ENSMUST00000151620ENSMUST00000173776
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160185 ENST00000291535 N/A N/A N/A N/A N/A 0.561±0.00 N/A N/A N/A 0.496±0.20 N/A N/A 0.057±0.00 N/A
ENST00000319294 N/A 2.469±0.00 N/A N/A N/A 0.025±0.00 N/A 0.042±0.00 0.038±0.00 N/A N/A 0.205±0.08 0.287±0.00 N/A
ENST00000398367 N/A N/A 0.061±0.00 0.058±0.00 0.060±0.00 N/A 0.031±0.02 N/A 0.042±0.00 N/A N/A 0.027±0.00 0.111±0.00 N/A
ENST00000473381 N/A 0.643±0.00 N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00
ENSG00000160188 ENST00000291536 N/A N/A N/A 8.308±0.00 N/A 0.822±0.00 N/A N/A N/A 23.813±0.00 N/A 11.376±11.45 N/A 15.668±4.45
ENST00000398352 N/A N/A N/A 0.957±0.00 N/A N/A N/A N/A N/A 5.690±3.43 N/A 8.941±0.00 N/A 12.444±3.51
ENST00000493019 N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A 0.584±0.00 N/A N/A N/A N/A
ENSG00000160190 ENST00000352133 0.890±0.00 3.463±0.00 N/A 1.044±0.00 0.929±0.47 2.095±0.59 1.105±0.00 N/A 0.698±0.00 1.146±0.00 2.226±0.00 5.644±1.32 1.875±0.58 N/A
ENST00000398341 N/A 2.381±0.00 0.240±0.00 N/A N/A N/A N/A 0.121±0.00 0.365±0.00 N/A 0.415±0.00 8.178±2.89 2.700±0.81 7.672±2.01
ENST00000398343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252619 ENST00000516810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.381±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024033 ENSMUST00000024832 0.298±0.21 0.193±0.05 0.698±0.21 6.067±7.59 0.170±0.11 0.331±0.13 0.420±0.27 0.507±0.14 0.106±0.07 6.634±1.16 0.471±0.22 8.363±6.57 1.285±0.88 849.722±1049.00
ENSMUSG00000042345 ENSMUST00000048656 0.089±0.01 N/A 0.081±0.01 N/A 2.617±1.27 0.157±0.07 N/A 0.261±0.02 2.839±2.92 0.156±0.01 N/A 0.454±0.20 0.021±0.01 0.146±0.05
ENSMUST00000144772 0.228±0.00 N/A N/A N/A N/A 0.207±0.00 N/A N/A N/A 0.202±0.02 N/A N/A 0.407±0.00 N/A
ENSMUST00000147686 0.160±0.05 N/A N/A N/A 3.427±0.00 N/A N/A N/A 0.249±0.00 N/A N/A 1.138±0.00 N/A N/A
ENSMUST00000151620 0.093±0.02 0.078±0.02 N/A 0.040±0.04 N/A N/A 0.082±0.02 0.060±0.02 0.028±0.00 0.095±0.00 0.165±0.00 0.354±0.24 0.075±0.05 N/A
ENSMUST00000173776 N/A 0.396±0.00 N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A 0.438±0.00 N/A N/A

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