C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CUGBP, Elav-like family member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161082 CELF5 9606 + 19:3224703-3297076 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000292672 CELF5-001 3224703-3297076 protein_coding
  ENST00000334293 CELF5-004 3225485-3297016 nonsense_mediated_decay
  ENST00000541430 CELF5-002 3224704-3296336 protein_coding
  ENST00000586050 CELF5-008 3270614-3290347 processed_transcript
  ENST00000588101 CELF5-007 3282257-3286791 processed_transcript
  ENST00000588350 CELF5-005 3273905-3297076 nonsense_mediated_decay
  ENST00000589370 CELF5-009 3270621-3282453 processed_transcript
  ENST00000591483 CELF5-006 3284762-3293401 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000292672ENST00000541430ENST00000588101ENST00000588350ENST00000589370
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000292672 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A
ENST00000541430 N/A 2.519±0.48 N/A 0.161±0.00 0.014±0.00 0.056±0.04 0.015±0.00 N/A N/A 1.245±0.00 N/A 1.595±1.21
ENST00000588101 0.188±0.00 N/A N/A 0.459±0.00 0.071±0.00 0.464±0.30 0.066±0.00 0.048±0.00 0.109±0.00 N/A N/A N/A
ENST00000588350 N/A 3.441±0.00 0.105±0.03 0.115±0.00 N/A 0.009±0.00 N/A N/A N/A 0.052±0.04 0.052±0.00 0.447±0.00
ENST00000589370 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071375 celf5a cugbp, Elav-like family member 5a protein_coding Danio_rerio
ENSDARG00000090727 celf5b cugbp, Elav-like family member 5b protein_coding Danio_rerio
ENSMUSG00000034818 Celf5 CUGBP, Elav-like family member 5 protein_coding Mus_musculus

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