C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUGBP, Elav-like family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000541430 CELF5-002 ENSG00000161082 9606 + 19:3224704-3296336 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverOvaryTestisENST00000541430
Transcript ID Brain Colon Heart Kidney Liver Ovary Testis
ENST00000541430 2.519±0.48 0.161±0.00 0.014±0.00 0.056±0.04 0.015±0.00 1.245±0.00 1.595±1.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118763 Celf5-001 protein_coding Mus_musculus 0 1068
ENSMUST00000120508 Celf5-003 protein_coding Mus_musculus 0 1050
ENSMUST00000119060 Celf5-004 protein_coding Mus_musculus 0 702
ENSMUST00000120856 Celf5-002 protein_coding Mus_musculus 0 682
ENSMUST00000145375 Celf5-008 retained_intron Mus_musculus 0 634
ENSMUST00000141207 Celf5-005 retained_intron Mus_musculus 0 529
ENSMUST00000118549 Celf6-005 protein_coding Mus_musculus 0 412
ENSMUST00000034840 Celf6-001 protein_coding Mus_musculus 0 412
ENSMUST00000115816 Celf4-202 protein_coding Mus_musculus 0 366
ENSMUST00000025117 Celf4-201 protein_coding Mus_musculus 0 366
ENSMUST00000128494 Celf5-006 retained_intron Mus_musculus 0 364
ENSMUST00000143916 Celf6-004 nonsense_mediated_decay Mus_musculus 0 340
ENSMUST00000147524 Celf5-007 protein_coding Mus_musculus 0 315
ENSMUST00000129357 Celf6-006 nonsense_mediated_decay Mus_musculus 0 244

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