C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CUGBP, Elav-like family member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034818 Celf5 10090 - 10:81459227-81482709 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118763 Celf5-001 81459227-81482709 protein_coding
  ENSMUST00000119060 Celf5-004 81459228-81473127 protein_coding
  ENSMUST00000120508 Celf5-003 81461548-81482684 protein_coding
  ENSMUST00000120856 Celf5-002 81460930-81474844 protein_coding
  ENSMUST00000128494 Celf5-006 81467759-81482672 retained_intron
  ENSMUST00000141207 Celf5-005 81467507-81473378 retained_intron
  ENSMUST00000145375 Celf5-008 81467015-81470807 retained_intron
  ENSMUST00000147524 Celf5-007 81469445-81473002 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118763ENSMUST00000119060ENSMUST00000120508ENSMUST00000120856ENSMUST00000128494ENSMUST00000141207ENSMUST00000145375ENSMUST00000147524
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118763 0.076±0.04 0.147±0.09 0.075±0.00 38.698±25.65 0.100±0.01 0.541±0.02 0.058±0.00 0.063±0.00 0.090±0.08 0.107±0.06 N/A 0.159±0.06 0.050±0.00 N/A
ENSMUST00000119060 N/A N/A N/A 2.363±0.00 0.054±0.00 N/A 0.079±0.00 0.029±0.01 0.005±0.00 N/A 0.026±0.01 0.081±0.05 0.044±0.00 6.868±0.38
ENSMUST00000120508 0.108±0.02 0.296±0.08 N/A 24.402±1.65 0.262±0.17 N/A 0.026±0.00 0.058±0.05 N/A 0.127±0.06 0.013±0.00 0.207±0.14 0.068±0.02 18.779±1.91
ENSMUST00000120856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.858±1.99
ENSMUST00000128494 N/A 0.790±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141207 N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145375 N/A N/A N/A 126.757±14.87 0.537±0.01 N/A 0.335±0.00 0.057±0.00 N/A 0.278±0.04 N/A 0.426±0.09 N/A 32.040±3.64
ENSMUST00000147524 N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071375 celf5a cugbp, Elav-like family member 5a protein_coding Danio_rerio
ENSDARG00000090727 celf5b cugbp, Elav-like family member 5b protein_coding Danio_rerio
ENSG00000161082 CELF5 CUGBP, Elav-like family member 5 protein_coding Homo_sapiens

Loading