C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUGBP, Elav-like family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588350 CELF5-005 ENSG00000161082 9606 + 19:3273905-3297076 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyOvaryPlacentaTestisENST00000588350
Transcript ID Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000588350 3.441±0.00 0.105±0.03 0.115±0.00 0.009±0.00 0.052±0.04 0.052±0.00 0.447±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119060 Celf5-004 protein_coding Mus_musculus 0 1323
ENSMUST00000118763 Celf5-001 protein_coding Mus_musculus 0 1323
ENSMUST00000120508 Celf5-003 protein_coding Mus_musculus 0 1304
ENSMUST00000120856 Celf5-002 protein_coding Mus_musculus 0 1304
ENSMUST00000145375 Celf5-008 retained_intron Mus_musculus 0 682
ENSMUST00000141207 Celf5-005 retained_intron Mus_musculus 0 488
ENSMUST00000128494 Celf5-006 retained_intron Mus_musculus 0 311
ENSMUST00000147524 Celf5-007 protein_coding Mus_musculus 0 276
ENSMUST00000115816 Celf4-202 protein_coding Mus_musculus 0 243
ENSMUST00000025117 Celf4-201 protein_coding Mus_musculus 0 237

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