C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytoglobin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161544 CYGB 9606 - 17:76527356-76551175 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293230 CYGB-001 76527356-76537905 protein_coding
  ENST00000586160 CYGB-004 76528057-76528993 processed_transcript
  ENST00000589145 CYGB-005 76528534-76551175 protein_coding
  ENST00000589342 CYGB-002 76528282-76537652 protein_coding
  ENST00000590175 CYGB-003 76528368-76532065 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000293230ENST00000586160ENST00000589145ENST00000589342ENST00000590175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000293230 38.539±0.00 15.000±0.00 0.634±0.00 3.236±2.16 10.767±9.76 12.653±11.69 6.389±4.40 1.905±0.38 0.845±0.29 9.651±8.04 3.935±3.63 8.017±6.22 13.602±6.48 5.011±3.03
ENST00000586160 N/A N/A 0.405±0.00 N/A 1.592±0.00 1.707±0.00 N/A N/A 1.273±0.00 N/A N/A N/A N/A N/A
ENST00000589145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.779±0.00
ENST00000589342 35.986±0.00 12.610±0.00 N/A N/A N/A 16.100±13.84 N/A 2.498±0.00 1.397±0.00 N/A N/A 2.033±0.34 N/A 10.925±0.00
ENST00000590175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.858±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CA CIL_0000CA_0001 CGP 17:76470891-76551175
CIL_0000CF CIL_0000CF_0001 CGP 17:76527356-76553578

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004601 ISS peroxidase activity
GO:0005344 IEA:NAS oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005737 IEA cytoplasm
GO:0006979 ISS response to oxidative stress
GO:0015671 IEA:NAS oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0055114 ISS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038260 cygb1 cytoglobin 1 protein_coding Danio_rerio
ENSDARG00000052289 CYGB (2 of 3) cytoglobin protein_coding Danio_rerio
ENSDARG00000070148 cygb2 cytoglobin 2 protein_coding Danio_rerio
ENSMUSG00000020810 Cygb cytoglobin protein_coding Mus_musculus

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