C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoglobin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000293230 CYGB-001 ENSG00000161544 9606 - 17:76527356-76537905 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000293230
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000293230 38.539±0.00 15.000±0.00 0.634±0.00 3.236±2.16 10.767±9.76 12.653±11.69 6.389±4.40 1.905±0.38 0.845±0.29 9.651±8.04 3.935±3.63 8.017±6.22 13.602±6.48 5.011±3.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CA CIL_0000CA_0001 CGP 17:76470891-76551175
CIL_0000CF CIL_0000CF_0001 CGP 17:76527356-76553578

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004601 ISS peroxidase activity
GO:0005344 IEA:NAS oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005737 IEA cytoplasm
GO:0006979 ISS response to oxidative stress
GO:0015671 IEA:NAS oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0055114 ISS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021166 Cygb-001 protein_coding Mus_musculus 0 1279
ENSMUST00000178875 Gm11744-202 protein_coding Mus_musculus 0 274
ENSMUST00000148484 Gm11744-002 nonsense_mediated_decay Mus_musculus 0 274

Loading