C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoglobin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589342 CYGB-002 ENSG00000161544 9606 - 17:76528282-76537652 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverOvaryTestisENST00000589342
Transcript ID Adipose Adrenal Colon Kidney Liver Ovary Testis
ENST00000589342 35.986±0.00 12.610±0.00 16.100±13.84 2.498±0.00 1.397±0.00 2.033±0.34 10.925±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CA CIL_0000CA_0001 CGP 17:76470891-76551175
CIL_0000CF CIL_0000CF_0001 CGP 17:76527356-76553578

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021166 Cygb-001 protein_coding Mus_musculus 0 604
ENSMUST00000178875 Gm11744-202 protein_coding Mus_musculus 0 274
ENSMUST00000148484 Gm11744-002 nonsense_mediated_decay Mus_musculus 0 274

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