C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipase C, delta 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161714 PLCD3 9606 - 17:45108967-45133354 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000538093 PLCD3-003 45120436-45133213 protein_coding
  ENST00000538988 PLCD3-004 45118372-45119012 processed_transcript
  ENST00000539433 PLCD3-011 45112303-45113548 protein_coding
  ENST00000542173 PLCD3-006 45118254-45118922 retained_intron
  ENST00000543623 PLCD3-010 45112423-45115128 processed_transcript
  ENST00000544446 PLCD3-012 45121236-45132518 processed_transcript
  ENST00000546350 PLCD3-005 45118056-45119089 retained_intron
  ENST00000590644 PLCD3-013 45120355-45133354 protein_coding
  ENST00000611986 PLCD3-007 45114250-45116711 processed_transcript
  ENST00000615898 PLCD3-008 45113572-45115378 processed_transcript
  ENST00000618022 PLCD3-009 45113478-45115343 retained_intron
  ENST00000619929 PLCD3-001 45108967-45132498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverMuscleOvaryPlacentaTestisENST00000619929
Transcript ID Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000619929 7.755±5.52 7.653±0.00 5.386±3.14 1.717±0.00 7.108±3.98 27.600±0.00 11.447±3.67 6.102±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006U9 CIL_0006U9_0001 CGP 17:45023340-45109016
CIL_0004D8 CIL_0004D8_0002 CGP 17:45051610-45133354
CIL_00039B CIL_00039B_0001 CGP 17:45108967-45144181

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0004435 IEA phosphatidylinositol phospholipase C activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0005886 TAS plasma membrane
GO:0006629 IEA lipid metabolic process
GO:0007165 IEA signal transduction
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016042 IEA lipid catabolic process
GO:0035556 IEA intracellular signal transduction
GO:0042127 IEA regulation of cell proliferation
GO:0043647 TAS inositol phosphate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0060716 IEA labyrinthine layer blood vessel development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052957 plcd3a phospholipase C, delta 3a protein_coding Danio_rerio
ENSDARG00000079572 plcd3b phospholipase C, delta 3b protein_coding Danio_rerio
ENSMUSG00000020937 Plcd3 phospholipase C, delta 3 protein_coding Mus_musculus

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