C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipase C, delta 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020937 Plcd3 10090 - 11:103070304-103101658 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103077 Plcd3-001 103070304-103101658 protein_coding
  ENSMUST00000124740 Plcd3-005 103070585-103071750 processed_transcript
  ENSMUST00000128650 Plcd3-002 103070304-103078294 protein_coding
  ENSMUST00000142970 Plcd3-003 103081730-103101591 processed_transcript
  ENSMUST00000143012 Plcd3-004 103080553-103101618 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103077ENSMUST00000124740ENSMUST00000128650ENSMUST00000143012
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103077 7.867±3.44 9.034±1.31 16.548±1.68 1.529±1.04 6.942±3.31 5.134±1.82 3.375±1.40 3.145±0.22 0.366±0.30 4.515±0.99 1.601±0.73 5.732±2.60 4.464±2.23 1.495±0.59
ENSMUST00000124740 N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A
ENSMUST00000128650 2.095±0.30 N/A 3.194±0.11 1.069±1.07 4.112±1.67 2.505±0.40 3.249±1.09 3.021±0.68 0.295±0.19 1.375±0.40 0.840±0.42 1.687±0.39 2.133±0.98 0.494±0.07
ENSMUST00000143012 N/A 13.979±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D8 CIL_0004D8_0003 CGP 11:103028190-103101658
CIL_00039B CIL_00039B_0002 CGP 11:103070304-103112200

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IGI angiogenesis
GO:0004435 IEA phosphatidylinositol phospholipase C activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005829 IEA cytosol
GO:0016020 IEA membrane
GO:0016042 IEA lipid catabolic process
GO:0035556 IEA intracellular signal transduction
GO:0042127 IGI regulation of cell proliferation
GO:0060716 IGI labyrinthine layer blood vessel development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052957 plcd3a phospholipase C, delta 3a protein_coding Danio_rerio
ENSDARG00000079572 plcd3b phospholipase C, delta 3b protein_coding Danio_rerio
ENSG00000161714 PLCD3 phospholipase C, delta 3 protein_coding Homo_sapiens

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