C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: formin-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161791 FMNL3 9606 - 12:49636499-49708165 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335154 FMNL3-002 49636499-49707414 protein_coding
  ENST00000352151 FMNL3-001 49644953-49707393 protein_coding
  ENST00000549137 FMNL3-004 49644953-49652242 retained_intron
  ENST00000550424 FMNL3-006 49666159-49708165 protein_coding
  ENST00000550488 FMNL3-003 49644931-49707220 protein_coding
  ENST00000550668 FMNL3-007 49637942-49639143 processed_transcript
  ENST00000550970 FMNL3-005 49661735-49668554 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000335154ENST00000352151ENST00000549137ENST00000550488
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000335154 7.996±0.00 1.838±0.00 N/A 0.760±0.00 0.224±0.00 N/A N/A N/A 0.974±0.00 2.889±0.94 1.065±0.34 2.851±0.00
ENST00000352151 N/A N/A 0.698±0.00 3.397±0.00 1.334±0.36 1.273±0.00 2.149±0.00 4.183±2.36 N/A 8.677±0.00 3.033±0.08 N/A
ENST00000549137 N/A N/A N/A N/A N/A N/A N/A 5.438±0.00 N/A N/A N/A N/A
ENST00000550488 10.381±0.00 N/A 1.142±0.00 3.317±0.00 3.158±0.00 0.762±0.00 N/A 6.137±0.00 N/A 3.007±0.00 3.588±0.78 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009O CIL_00009O_0001 CGP 12:49636499-49764934

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0007010 IMP cytoskeleton organization
GO:0008360 IMP regulation of cell shape
GO:0016043 IEA cellular component organization
GO:0016477 IMP cell migration
GO:0017048 IEA Rho GTPase binding
GO:0030036 IEA actin cytoskeleton organization
GO:0032794 ISS GTPase activating protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004372 fmnl3 formin-like 3 protein_coding Danio_rerio
ENSMUSG00000023008 Fmnl3 formin-like 3 protein_coding Mus_musculus

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