C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: formin-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023008 Fmnl3 10090 - 15:99317225-99370482 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081224 Fmnl3-002 99317225-99370449 protein_coding
  ENSMUST00000088233 Fmnl3-001 99317225-99370482 protein_coding
  ENSMUST00000120633 Fmnl3-003 99317225-99370449 protein_coding
  ENSMUST00000139767 Fmnl3-005 99324386-99325653 retained_intron
  ENSMUST00000140368 Fmnl3-006 99327844-99335727 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081224ENSMUST00000088233ENSMUST00000120633ENSMUST00000139767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081224 N/A N/A N/A N/A 3.108±0.35 0.679±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000088233 11.372±1.33 8.853±1.17 3.287±0.22 7.512±3.36 7.345±3.13 3.316±0.73 7.130±0.71 10.910±0.44 1.748±1.29 24.919±2.86 1.923±0.74 22.041±4.00 9.692±6.23 2.336±0.63
ENSMUST00000120633 N/A 2.470±0.88 N/A 1.628±0.00 1.882±0.66 0.578±0.00 N/A N/A 0.546±0.00 N/A 0.347±0.00 4.036±0.31 N/A N/A
ENSMUST00000139767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.320±0.00 4.525±0.00 3.842±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009O CIL_00009O_0002 CGP 15:99317225-99410049

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0007010 ISS cytoskeleton organization
GO:0008360 ISS regulation of cell shape
GO:0016477 ISS cell migration
GO:0017048 IEA Rho GTPase binding
GO:0030036 IEA actin cytoskeleton organization
GO:0032794 IDA GTPase activating protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004372 fmnl3 formin-like 3 protein_coding Danio_rerio
ENSG00000161791 FMNL3 formin-like 3 protein_coding Homo_sapiens

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