C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161973 CCDC42 9606 - 17:8729934-8745219 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293845 CCDC42-001 8729934-8744836 protein_coding
  ENST00000539522 CCDC42-002 8729950-8744787 protein_coding
  ENST00000581598 CCDC42-003 8744574-8745219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverLungOvaryPlacentaTestisENST00000293845ENST00000539522ENST00000581598
Transcript ID Adipose Adrenal Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000293845 0.046±0.00 0.187±0.00 N/A N/A N/A N/A 0.051±0.00 N/A 13.565±0.77
ENST00000539522 N/A N/A 0.258±0.00 0.044±0.00 0.019±0.00 0.066±0.00 0.050±0.00 0.129±0.08 82.522±43.33
ENST00000581598 N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AZ CIL_0009AZ_0001 VISTA 17:8380027-8982000
CIL_00088C CIL_00088C_0001 VISTA 17:8397056-8997791

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000045915 Ccdc42 coiled-coil domain containing 42 protein_coding Mus_musculus

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