C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045915 Ccdc42 10090 + 11:68587021-68597966 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063006 Ccdc42-002 68587133-68597945 protein_coding
  ENSMUST00000102612 Ccdc42-003 68594055-68597954 protein_coding
  ENSMUST00000154294 Ccdc42-001 68587021-68597966 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000063006ENSMUST00000102612ENSMUST00000154294
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000063006 N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A 0.106±0.00 N/A 40.801±0.00
ENSMUST00000102612 0.044±0.00 0.111±0.02 0.051±0.00 0.239±0.13 0.067±0.02 0.153±0.04 0.041±0.04 3.708±0.84 0.583±0.40 2.384±3.73 N/A
ENSMUST00000154294 0.050±0.00 N/A 0.369±0.41 N/A 0.066±0.00 0.110±0.00 0.022±0.00 N/A 0.166±0.11 1.213±0.97 49.921±22.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088C CIL_00088C_0002 VISTA 11:68323475-68924174
CIL_0009AZ CIL_0009AZ_0002 VISTA 11:68337699-68940744

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000161973 CCDC42 coiled-coil domain containing 42 protein_coding Homo_sapiens

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