C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000293845 CCDC42-001 ENSG00000161973 9606 - 17:8729934-8744836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalOvaryTestisENST00000293845
Transcript ID Adipose Adrenal Ovary Testis
ENST00000293845 0.046±0.00 0.187±0.00 0.051±0.00 13.565±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AZ CIL_0009AZ_0001 VISTA 17:8380027-8982000
CIL_00088C CIL_00088C_0001 VISTA 17:8397056-8997791

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154294 Ccdc42-001 protein_coding Mus_musculus 0 1018
ENSMUST00000102612 Ccdc42-003 protein_coding Mus_musculus 0 536
ENSMUST00000063006 Ccdc42-002 protein_coding Mus_musculus 0 483

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