C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 1 (glutamate transporter), member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162383 SLC1A7 9606 - 1:53087179-53142632 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371491 SLC1A7-002 53107928-53142617 protein_coding
  ENST00000371494 SLC1A7-001 53087183-53142577 protein_coding
  ENST00000488036 SLC1A7-003 53087184-53090982 processed_transcript
  ENST00000611397 SLC1A7-201 53087179-53142632 protein_coding
  ENST00000620288 SLC1A7-202 53087184-53142621 protein_coding
  ENST00000620347 SLC1A7-203 53087179-53142632 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371491ENST00000371494ENST00000488036ENST00000611397ENST00000620288
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371491 N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000371494 0.173±0.00 N/A 0.021±0.00 N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A
ENST00000488036 N/A 0.117±0.00 0.113±0.00 1.898±0.00 N/A 0.103±0.07 0.063±0.00 N/A 0.321±0.05 0.169±0.16 3.889±1.29 0.579±0.00 1.123±0.00
ENST00000611397 N/A N/A 0.106±0.00 0.291±0.00 N/A N/A N/A 0.180±0.00 N/A 0.024±0.00 0.767±0.00 0.260±0.00 0.713±0.00
ENST00000620288 N/A N/A 0.046±0.00 N/A 0.120±0.00 N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WC CIL_0006WC_0002 CGP 1:53062052-53142632

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005313 TAS L-glutamate transmembrane transporter activity
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006835 TAS:IEA dicarboxylic acid transport
GO:0015813 TAS L-glutamate transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0017153 IEA sodium:dicarboxylate symporter activity
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026248 slc1a7b solute carrier family 1 (glutamate transporter), member 7b protein_coding Danio_rerio
ENSDARG00000034940 slc1a7a solute carrier family 1 (glutamate transporter), member 7a protein_coding Danio_rerio
ENSMUSG00000008932 Slc1a7 solute carrier family 1 (glutamate transporter), member 7 protein_coding Mus_musculus

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