C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 1 (glutamate transporter), member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488036 SLC1A7-003 ENSG00000162383 9606 - 1:53087184-53090982 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000488036
Transcript ID Bladder Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000488036 0.117±0.00 0.113±0.00 1.898±0.00 0.103±0.07 0.063±0.00 0.321±0.05 0.169±0.16 3.889±1.29 0.579±0.00 1.123±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WC CIL_0006WC_0002 CGP 1:53062052-53142632

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124190 Slc1a7-002 retained_intron Mus_musculus 0 532
ENSMUST00000106713 Slc1a7-001 protein_coding Mus_musculus 0 525
ENSMUST00000161119 Slc1a1-002 retained_intron Mus_musculus 2e-18 99
ENSMUST00000179171 4430402I18Rik-201 protein_coding Mus_musculus 2e-17 95
ENSMUST00000162189 Slc1a1-004 retained_intron Mus_musculus 2e-17 95
ENSMUST00000160702 Slc1a1-003 retained_intron Mus_musculus 2e-17 95
ENSMUST00000025875 Slc1a1-001 protein_coding Mus_musculus 2e-17 95

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