C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006WC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019025-ENSDARG00000026248 CGP 7955 23:42270576-42478634
GeneTranscriptPositionBiotype
ENSDARG00000019025 (podn)
podocan 		ENSDART00000002790 (podn-201) 42270576-42310112 protein_coding
ENSDART00000138132 (podn-001) 42270594-42296182 protein_coding
ENSDARG00000026248 (slc1a7b)
solute carrier family 1 (glutamate transporter), member 7b 		ENSDART00000122074 (slc1a7b-201) 42331076-42478634 protein_coding
ENSDART00000144183 (slc1a7b-001) 42331077-42347058 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006WC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174348-ENSG00000162383 CGP 9606 1:53062052-53142632
GeneTranscriptPositionBiotype
ENSG00000162383 (SLC1A7)
solute carrier family 1 (glutamate transporter), member 7 		ENST00000371491 (SLC1A7-002) 53107928-53142617 protein_coding
ENST00000371494 (SLC1A7-001) 53087183-53142577 protein_coding
ENST00000488036 (SLC1A7-003) 53087184-53090982 processed_transcript
ENST00000611397 (SLC1A7-201) 53087179-53142632 protein_coding
ENST00000620288 (SLC1A7-202) 53087184-53142621 protein_coding
ENST00000620347 (SLC1A7-203) 53087179-53142632 protein_coding
ENSG00000174348 (PODN)
podocan 		ENST00000312553 (PODN-001) 53062213-53085502 protein_coding
ENST00000371500 (PODN-005) 53062182-53085502 protein_coding
ENST00000395871 (PODN-201) 53062052-53085501 protein_coding
ENST00000471210 (PODN-002) 53070909-53073754 processed_transcript
ENST00000471285 (PODN-003) 53078611-53082094 processed_transcript
ENST00000490650 (PODN-004) 53078650-53082188 processed_transcript
ENST00000618387 (PODN-202) 53062213-53085501 protein_coding
ENSG00000232993 (RP11-334A14.5)
 ENST00000447867 (RP11-334A14.5-001) 53069938-53085502 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WC_0001ENSDARG00000019025ENSDART00000002790ENSDART00000138132ENSDARG00000026248ENSDART00000122074ENSDART00000144183CIL_0006WC_0002ENSG00000162383ENST00000371491ENST00000371494ENST00000488036ENST00000611397ENST00000620288ENST00000620347ENSG00000174348ENST00000312553ENST00000371500ENST00000395871ENST00000471210ENST00000471285ENST00000490650ENST00000618387ENSG00000232993ENST00000447867
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WC_0001ENSDARG00000019025ENSDART00000002790ENSDART00000138132ENSDARG00000026248ENSDART00000122074ENSDART00000144183CIL_0006WC_0002ENSG00000162383ENST00000371491ENST00000371494ENST00000488036ENST00000611397ENST00000620288ENSG00000174348ENST00000312553ENST00000371500ENST00000395871ENST00000471210ENST00000490650ENSG00000232993ENST00000447867
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019025 ENSDART00000002790 N/A N/A N/A 0.228±0.14 N/A N/A 0.689±0.00 1.185±0.00 N/A N/A 3.021±0.00 N/A N/A N/A
ENSDART00000138132 N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A
ENSDARG00000026248 ENSDART00000122074 N/A N/A N/A 1.701±0.66 N/A N/A 0.154±0.00 0.039±0.00 N/A N/A 0.044±0.00 N/A N/A N/A
ENSDART00000144183 N/A N/A N/A N/A N/A N/A 0.496±0.28 0.933±0.00 N/A N/A 0.219±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162383 ENST00000371491 N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000371494 N/A 0.173±0.00 N/A 0.021±0.00 N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A
ENST00000488036 N/A N/A 0.117±0.00 0.113±0.00 1.898±0.00 N/A 0.103±0.07 0.063±0.00 N/A 0.321±0.05 0.169±0.16 3.889±1.29 0.579±0.00 1.123±0.00
ENST00000611397 N/A N/A N/A 0.106±0.00 0.291±0.00 N/A N/A N/A 0.180±0.00 N/A 0.024±0.00 0.767±0.00 0.260±0.00 0.713±0.00
ENST00000620288 N/A N/A N/A 0.046±0.00 N/A 0.120±0.00 N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A
ENST00000620347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174348 ENST00000312553 N/A N/A N/A 1.157±0.00 4.143±0.00 0.565±0.00 0.921±0.00 2.435±0.00 6.419±1.75 25.651±0.00 2.251±0.21 55.997±55.86 12.930±3.71 53.866±47.96
ENST00000371500 N/A N/A N/A 0.044±0.00 N/A 0.656±0.00 0.305±0.00 N/A N/A N/A N/A N/A 3.432±0.00 N/A
ENST00000395871 N/A N/A N/A 0.356±0.00 N/A N/A N/A 0.622±0.00 N/A N/A N/A N/A N/A N/A
ENST00000471210 N/A N/A 0.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490650 N/A N/A N/A 0.361±0.00 N/A N/A 1.159±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000618387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232993 ENST00000447867 51.644±0.00 20.079±0.00 2.847±0.00 0.734±0.28 13.482±5.67 N/A 12.883±0.00 2.057±1.14 6.197±0.00 37.891±0.00 7.850±0.00 90.192±0.00 N/A N/A

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