C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 1 (glutamate transporter), member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611397 SLC1A7-201 ENSG00000162383 9606 - 1:53087179-53142632 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverMuscleOvaryPlacentaTestisENST00000611397
Transcript ID Brain Breast Liver Muscle Ovary Placenta Testis
ENST00000611397 0.106±0.00 0.291±0.00 0.180±0.00 0.024±0.00 0.767±0.00 0.260±0.00 0.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WC CIL_0006WC_0002 CGP 1:53062052-53142632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006835 IEA dicarboxylic acid transport
GO:0016020 IEA membrane
GO:0017153 IEA sodium:dicarboxylate symporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106713 Slc1a7-001 protein_coding Mus_musculus 0 1389
ENSMUST00000124190 Slc1a7-002 retained_intron Mus_musculus 0 442
ENSMUST00000179171 4430402I18Rik-201 protein_coding Mus_musculus 0 233
ENSMUST00000162189 Slc1a1-004 retained_intron Mus_musculus 0 233
ENSMUST00000160702 Slc1a1-003 retained_intron Mus_musculus 0 233
ENSMUST00000025875 Slc1a1-001 protein_coding Mus_musculus 0 233
ENSMUST00000161119 Slc1a1-002 retained_intron Mus_musculus 3e-17 95

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