C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162669 HFM1 9606 - 1:91260766-91404869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370425 HFM1-002 91260766-91404869 protein_coding
  ENST00000427444 HFM1-006 91385614-91404840 protein_coding
  ENST00000430465 HFM1-008 91262186-91347449 protein_coding
  ENST00000448819 HFM1-005 91380233-91404856 protein_coding
  ENST00000455133 HFM1-007 91394173-91404735 protein_coding
  ENST00000462405 HFM1-009 91260766-91352637 processed_transcript
  ENST00000481900 HFM1-001 91377443-91404809 retained_intron
  ENST00000488023 HFM1-003 91377759-91404808 retained_intron
  ENST00000497520 HFM1-004 91316140-91328937 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000370425ENST00000427444ENST00000430465ENST00000448819ENST00000455133ENST00000462405ENST00000481900
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000370425 N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A 0.246±0.10 0.038±0.01 1.504±0.00
ENST00000427444 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.205±0.00 N/A N/A
ENST00000430465 0.055±0.00 0.211±0.00 0.170±0.00 0.039±0.00 0.070±0.00 0.026±0.00 N/A 0.019±0.00 0.018±0.00 0.298±0.18 0.013±0.00 2.778±1.20
ENST00000448819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A
ENST00000455133 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462405 0.026±0.00 N/A N/A 0.036±0.00 0.015±0.00 N/A 0.250±0.00 N/A 0.019±0.00 0.296±0.24 0.012±0.00 N/A
ENST00000481900 N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000699 CIL_000699_0001 CGP 1:90915298-91404869
CIL_00069J CIL_00069J_0001 CGP 1:91260766-91525764

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000712 IEA resolution of meiotic recombination intermediates
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068922 hfm1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000043410 Hfm1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) protein_coding Mus_musculus

Loading