C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tudor domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162782 TDRD5 9606 + 1:179591613-179691272 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294848 TDRD5-001 179591890-179691272 protein_coding
  ENST00000367614 TDRD5-002 179591613-179691270 protein_coding
  ENST00000417329 TDRD5-003 179639951-179691272 protein_coding
  ENST00000444136 TDRD5-201 179591622-179691263 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000294848ENST00000367614ENST00000417329ENST00000444136
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000294848 0.046±0.00 0.007±0.00 N/A 0.256±0.00 0.254±0.00 N/A N/A 0.310±0.00 0.063±0.00 N/A N/A 0.111±0.07 0.077±0.01 2.228±0.00
ENST00000367614 N/A N/A 0.104±0.00 N/A 0.382±0.00 0.077±0.00 N/A N/A 0.072±0.00 0.162±0.00 N/A 0.070±0.00 N/A N/A
ENST00000417329 0.047±0.00 N/A N/A 0.014±0.00 N/A 0.101±0.05 0.013±0.00 0.114±0.00 N/A N/A 0.046±0.00 0.041±0.03 0.069±0.01 4.133±0.00
ENST00000444136 N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A 0.162±0.00 N/A 8.443±4.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WB CIL_0001WB_0002 CGP 1:179550539-179691272
CIL_0001WE CIL_0001WE_0002 CGP 1:179591613-179816198

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007286 ISS spermatid development
GO:0030719 ISS P granule organization
GO:0033391 ISS chromatoid body
GO:0043046 ISS DNA methylation involved in gamete generation
GO:0071546 ISS pi-body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071450 tdrd5 tudor domain containing 5 protein_coding Danio_rerio
ENSMUSG00000060985 Tdrd5 tudor domain containing 5 protein_coding Mus_musculus

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