C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tudor domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294848 TDRD5-001 ENSG00000162782 9606 + 1:179591890-179691272 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverOvaryPlacentaTestisENST00000294848
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Ovary Placenta Testis
ENST00000294848 0.046±0.00 0.007±0.00 0.256±0.00 0.254±0.00 0.310±0.00 0.063±0.00 0.111±0.07 0.077±0.01 2.228±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WB CIL_0001WB_0002 CGP 1:179550539-179691272
CIL_0001WE CIL_0001WE_0002 CGP 1:179591613-179816198

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007286 ISS spermatid development
GO:0030719 ISS P granule organization
GO:0033391 ISS chromatoid body
GO:0043046 ISS DNA methylation involved in gamete generation
GO:0071546 ISS pi-body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121146 Tdrd5-001 protein_coding Mus_musculus 0 1116
ENSMUST00000167528 Tdrd5-002 protein_coding Mus_musculus 0 902
ENSMUST00000141760 Tdrd5-003 protein_coding Mus_musculus 0 405

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