C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001WB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042850-ENSDARG00000071450 CGP 7955 22:17473247-17502695
GeneTranscriptPositionBiotype
ENSDARG00000042850 (nphs2)
nephrosis 2, idiopathic, steroid-resistant (podocin) 		ENSDART00000062891 (nphs2-201) 17473251-17478545 protein_coding
ENSDART00000136119 (nphs2-001) 17473247-17478545 protein_coding
ENSDART00000144505 (nphs2-002) 17475717-17478237 processed_transcript
ENSDARG00000071450 (tdrd5)
tudor domain containing 5 		ENSDART00000105651 (tdrd5-201) 17484039-17502691 protein_coding
ENSDART00000134798 (tdrd5-001) 17483850-17502695 protein_coding
CIL_0001WB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116218-ENSG00000162782 CGP 9606 1:179550539-179691272
GeneTranscriptPositionBiotype
ENSG00000116218 (NPHS2)
nephrosis 2, idiopathic, steroid-resistant (podocin) 		ENST00000367615 (NPHS2-001) 179550539-179575933 protein_coding
ENST00000367616 (NPHS2-002) 179550539-179575952 protein_coding
ENSG00000162782 (TDRD5)
tudor domain containing 5 		ENST00000294848 (TDRD5-001) 179591890-179691272 protein_coding
ENST00000367614 (TDRD5-002) 179591613-179691270 protein_coding
ENST00000417329 (TDRD5-003) 179639951-179691272 protein_coding
ENST00000444136 (TDRD5-201) 179591622-179691263 protein_coding
ENSG00000227141 (RP11-545A16.3)
 ENST00000427215 (RP11-545A16.3-001) 179586705-179589175 processed_pseudogene
ENSG00000261060 (RP11-545A16.4)
 ENST00000567150 (RP11-545A16.4-001) 179590372-179591305 sense_overlapping

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WB_0001ENSDARG00000042850ENSDART00000062891ENSDART00000136119ENSDART00000144505ENSDARG00000071450ENSDART00000105651ENSDART00000134798CIL_0001WB_0002ENSG00000116218ENST00000367615ENST00000367616ENSG00000162782ENST00000294848ENST00000367614ENST00000417329ENST00000444136ENSG00000227141ENST00000427215ENSG00000261060ENST00000567150
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WB_0001ENSDARG00000042850ENSDART00000062891ENSDART00000136119ENSDART00000144505ENSDARG00000071450ENSDART00000105651ENSDART00000134798CIL_0001WB_0002ENSG00000116218ENST00000367615ENST00000367616ENSG00000162782ENST00000294848ENST00000367614ENST00000417329ENST00000444136ENSG00000227141ENST00000427215ENSG00000261060ENST00000567150
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042850 ENSDART00000062891 N/A N/A N/A 0.109±0.05 N/A N/A 0.114±0.00 3.692±0.31 N/A N/A 1.233±0.00 N/A N/A N/A
ENSDART00000136119 N/A N/A N/A 0.094±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144505 N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000071450 ENSDART00000105651 N/A N/A N/A N/A N/A N/A 0.095±0.05 5.148±0.92 0.300±0.00 N/A 0.038±0.00 N/A N/A N/A
ENSDART00000134798 N/A N/A N/A 0.186±0.06 N/A N/A N/A 2.217±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116218 ENST00000367615 N/A N/A 9.634±0.00 N/A N/A N/A N/A 51.963±0.00 0.081±0.00 N/A N/A N/A N/A N/A
ENST00000367616 N/A N/A 4.671±0.00 N/A 0.232±0.00 N/A N/A 15.505±0.00 0.187±0.00 N/A N/A N/A N/A N/A
ENSG00000162782 ENST00000294848 0.046±0.00 0.007±0.00 N/A 0.256±0.00 0.254±0.00 N/A N/A 0.310±0.00 0.063±0.00 N/A N/A 0.111±0.07 0.077±0.01 2.228±0.00
ENST00000367614 N/A N/A 0.104±0.00 N/A 0.382±0.00 0.077±0.00 N/A N/A 0.072±0.00 0.162±0.00 N/A 0.070±0.00 N/A N/A
ENST00000417329 0.047±0.00 N/A N/A 0.014±0.00 N/A 0.101±0.05 0.013±0.00 0.114±0.00 N/A N/A 0.046±0.00 0.041±0.03 0.069±0.01 4.133±0.00
ENST00000444136 N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A 0.162±0.00 N/A 8.443±4.68
ENSG00000227141 ENST00000427215 0.252±0.00 0.059±0.00 0.079±0.00 0.165±0.09 0.199±0.00 0.034±0.03 0.037±0.01 0.418±0.00 0.058±0.00 N/A 0.006±0.00 0.042±0.03 N/A 1.702±0.78
ENSG00000261060 ENST00000567150 0.658±0.00 1.426±0.00 0.283±0.00 0.219±0.00 0.450±0.37 0.011±0.00 0.132±0.00 0.258±0.00 0.164±0.00 0.032±0.00 0.068±0.00 0.446±0.33 0.155±0.00 0.799±0.00

Loading