C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tudor domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367614 TDRD5-002 ENSG00000162782 9606 + 1:179591613-179691270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverLungOvaryENST00000367614
Transcript ID Bladder Breast Colon Liver Lung Ovary
ENST00000367614 0.104±0.00 0.382±0.00 0.077±0.00 0.072±0.00 0.162±0.00 0.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WB CIL_0001WB_0002 CGP 1:179550539-179691272
CIL_0001WE CIL_0001WE_0002 CGP 1:179591613-179816198

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007286 ISS spermatid development
GO:0030719 ISS P granule organization
GO:0033391 ISS chromatoid body
GO:0043046 ISS DNA methylation involved in gamete generation
GO:0071546 ISS pi-body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121146 Tdrd5-001 protein_coding Mus_musculus 0 1116
ENSMUST00000167528 Tdrd5-002 protein_coding Mus_musculus 0 902
ENSMUST00000141760 Tdrd5-003 protein_coding Mus_musculus 0 405

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